Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0498 ATGGGCCAACCACTTCACCAAACGATAACCGCCGGAATCGGCGAGGCCGCCGCGGCGGTGGTTAGGGATTTTGAGGATTCGAAGCTTGTCGGAGTTCCCGTCGCGCTCGCCGGAGATGCTGACGTGGCGGAGAGAGAGCACGGCTGCGTCCCCAATCTTGAGGTCGCGGTGGCTGTGGAGGCCGTAGACGGCGCCGTTTTGAAGAGAAAGCGCGGTCGTCCGGCGAAGGGGGCTCCGAAAACGACAACGATTCCTCCGTCGAGGCAGAAGAAGGAGGAAGAAGATGTTTGCTTCATATGCTTCGATGGCGGAAGCCTCGTTCTCTGTGATCGCCGGGGTTGCCCTAAAGCATATCATCCCGCATGTATAAAGCGAGACGATGCCTTCTTTCGTTCAAAGGCCAAATGGAATTGCGGGTGGCATATATGTGGCATTTGTCAGAAGACATCCCATTACATGTGCTATACATGTACGTATTCTTTGTGCAAGGGATGTACAAGAGATTCTGATTTTGTTTCTTTGAGAGGAAATAAAGGTTTGTGTGGGATGTGCAAGAGAACGATAATGCTGATTGAGAACCCTGCCCAGGGAGATAAGGCAATGTGTGAAGTAGATTTTGATGACAAAGGCAGCTGGGAGTATCTTTTCAAGGTGTATTGGGTGTGTTTGAAAGAGAAGCTATCTTTGACAATGGATGAGCTCCTTCAAGCTAAAAGCCCATGGAAAAGGGCTACTCCTGTAAGTTGTAAGGTGGAAACTCCCCATGAACTTTATCATCTTAAAGATGACAAAGGTTCTGCTTCTGAAAACTCCTGTATAGACATAGAATCAAATAATTTGAAAAACAAGAAGCCTAGGAGAAGAGATAAACAAACATCTATTTGGGATGGTGTCTTGAATGATGTTGGATACAGTAGACATGACTTGCCAATTACCCGTGGGCTGATTGGAAACACGTGTATAATGAAAAACCAGATCAACCCTAATGACGTAGTAGTCAGTGACAGCACTAATGTAGGAGTTGTGAAATCAGAAGCATCTGGAGTTGCGTTGGACATTTCGCCATTGCTTTTCTCTACAGGGATGGAGCAGCCATTTAATGATTTTTTGAATGATAAGTTATGGCACTATCAGGATCCAGCTGGGAAGGTTCAAGGACCCTTTTCCATGTTGCAGCTGTATAAGTGGAATGCAAGTGGACATTTCCCTTCAGATCTCAGAATATGGAGGACAGATGAGAAACAAGATAATTCCATATTGTTAACAGATGCACTTAGTGGGAAGTCTTCTAAAAATGTGTCATTGGCATACAACAGCCAACCGCCATCTTTAGGGTCCAATGTTACATTGGATAAAGATAAAATTCAGGATGGTGTTAGGAATGAAACAAGGACTGAAATTCACACTGACAGCCAAATTATCATGCAAAGTGGGGTTGAAAAGGTGGGTGATACTTGTGCCCAGTCTAATGATAAAGATGAATCTGTTAGGAGCAATGGATTGCACTCTCATTCTTCTAGTTGGACTATGGCAGCAGATGGGAATAACAATGAGGGGCAAAGTGGAAATTTTGAAAGGATGGAGGAGTCATCCAAATGTGAAGTTTCTTGTCATGACCAGCCCCATTCACTACCTTCAACGGGCTTTTTCTTGAAATTGAATGAAAATCCTTCTGATATATTAAGGGAAGGTCATGGGATTGAGGGAAACTCTGAAGATAATGGAAATCATGGCTCGAACAGGACTCCTGAAGGTCAAAGTAATAGTGGGCAGAGTTATCAGAGACAATCAGACAGTGAAGAGAATTCAGGGCAGTCTTCAACACACAACTGGGAATGCCCTCAACCTCAAGTAATTCAACCAACGTGTAATACATCCATGTGGCAGGCAATCTTTGGCGAGCCCACTGATTTTAGCTCATTAGTCGATGAATCAGTGTCAGATCTGTTGGCTGAAGTCGAAGCAATGGAATCACTTGGTGGTGGTTTGGAGTCTCCCACTTCAATCATGAGATGTGATGACGACTTGACAGATGGTTCTAAAAATGACTGTCTCAGTTTTGCACTTGGGCTTAGCCCGATGCTTGATGCAGGTAAAGGTGATGCACTGAGCTCAACAGGCGATCTACACTTACCATCTCAGTCCACAGCAGCACAAGAACCATTTGGTCATCCTGTTGTACATCATAATCAAAGAATACGTGGGGAGCATTCTTCTAGAAGTTCTGAAGTTGAGAAGGATTACCCTGTGCAGTCTACTTTCTCTAGGATTAGCTGGAATCCGACCAATCAATTTTCCTGGGATCCTAAATGTTGA 2316 0.4465 MGQPLHQTITAGIGEAAAAVVRDFEDSKLVGVPVALAGDADVAEREHGCVPNLEVAVAVEAVDGAVLKRKRGRPAKGAPKTTTIPPSRQKKEEEDVCFICFDGGSLVLCDRRGCPKAYHPACIKRDDAFFRSKAKWNCGWHICGICQKTSHYMCYTCTYSLCKGCTRDSDFVSLRGNKGLCGMCKRTIMLIENPAQGDKAMCEVDFDDKGSWEYLFKVYWVCLKEKLSLTMDELLQAKSPWKRATPVSCKVETPHELYHLKDDKGSASENSCIDIESNNLKNKKPRRRDKQTSIWDGVLNDVGYSRHDLPITRGLIGNTCIMKNQINPNDVVVSDSTNVGVVKSEASGVALDISPLLFSTGMEQPFNDFLNDKLWHYQDPAGKVQGPFSMLQLYKWNASGHFPSDLRIWRTDEKQDNSILLTDALSGKSSKNVSLAYNSQPPSLGSNVTLDKDKIQDGVRNETRTEIHTDSQIIMQSGVEKVGDTCAQSNDKDESVRSNGLHSHSSSWTMAADGNNNEGQSGNFERMEESSKCEVSCHDQPHSLPSTGFFLKLNENPSDILREGHGIEGNSEDNGNHGSNRTPEGQSNSGQSYQRQSDSEENSGQSSTHNWECPQPQVIQPTCNTSMWQAIFGEPTDFSSLVDESVSDLLAEVEAMESLGGGLESPTSIMRCDDDLTDGSKNDCLSFALGLSPMLDAGKGDALSSTGDLHLPSQSTAAQEPFGHPVVHHNQRIRGEHSSRSSEVEKDYPVQSTFSRISWNPTNQFSWDPKC* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0498 771 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44 620 753 - -
Dod02g0498 771 SUPERFAMILY GYF domain 368 426 IPR035445 -
Dod02g0498 771 SMART PHD_3 96 142 IPR001965 -
Dod02g0498 771 ProSiteProfiles GYF domain profile. 372 426 IPR003169 GO:0005515
Dod02g0498 771 Gene3D - 374 430 IPR035445 -
Dod02g0498 771 Pfam GYF domain 375 416 IPR003169 GO:0005515
Dod02g0498 771 MobiDBLite consensus disorder prediction 483 527 - -
Dod02g0498 771 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 19 291 - -
Dod02g0498 771 CDD GYF 372 427 IPR003169 GO:0005515
Dod02g0498 771 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44 350 614 - -
Dod02g0498 771 ProSiteProfiles Zinc finger PHD-type profile. 94 160 IPR019787 -
Dod02g0498 771 SUPERFAMILY FYVE/PHD zinc finger 88 141 IPR011011 -
Dod02g0498 771 MobiDBLite consensus disorder prediction 572 617 - -
Dod02g0498 771 ProSitePatterns Zinc finger PHD-type signature. 97 157 IPR019786 -
Dod02g0498 771 MobiDBLite consensus disorder prediction 560 617 - -
Dod02g0498 771 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44 19 291 - -
Dod02g0498 771 CDD PHD5_NSD 96 141 - -
Dod02g0498 771 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 350 614 - -
Dod02g0498 771 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 620 753 - -
Dod02g0498 771 MobiDBLite consensus disorder prediction 500 524 - -
Dod02g0498 771 SMART gyf_5 373 428 IPR003169 GO:0005515
Dod02g0498 771 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 187 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0498 Dod-Chr2 6500086 6504670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0498 94 167 PHD Transcription Factor Family AT4G14920 33.784 8.87e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0498 - - aip:107642933 1090.87