Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0488 ATGGTTCTCAATCTTAGTGGCAATGGCTTCTCTGGAAAAATTCCTGCTAGTTTTGGAAATCTTTTCAGGCTCACTACGCTTGACTTGAGCAAACAGAATCTCTCTGGAGAGTTGCCGTTTGAGCTTTCTGGGTTGCCCAATCTACAAGCCATTGCTCTCCAGGAGAACAAGTTATCTGGGGTTGTCCCTGAAGGGTTTAGCAGTCTGATGAGCTTGCAATATTTGAACCTCAGCTCTAATGCCTTTTCTGGCCACATTCCTGAAAACTATGGTTTTCTTCGTTCCCTGCTTGTGCTTTCGTTGTCTGGTAATCTCATTACAGGGGTAATTCCTCCAGAGATTGGAAACTGCTCTGATATTGAAACCCTTGAGCTCGGATCCAATGCTTTGGCAGGTCATATTCCTGCTGATCTATCTCGCCTCACCCACTTGAAAGTGCTTGATTTGAGTAGGAACAATTTATCTGGGGATATGCCTGCGGATATCTCTAAATGCTCGTCTTTGAATGCTTTGTTAGTGGATCACAACCATCTTTCAGGTGACATACCAGCGTCATTGACAGATCTGTCAAACCTAACAATGCTGGATCTCTCTGCTAACAACTTCAGTGGGGAAATTCCTAGTAATCTTTCTATGATCCCTGGCTTGGTGTATTTCAATGTTTCGGGGAATGACTTGGAAGGTGAGATACCTCCAACATTAGGATCTAGGTTCAACAATCCCTCTGCATTTGCAGATAATCAGAATTTGTGTGGGAAGCCATTGGATAGGAAGTGCGAGGAGATAACTGAAAGGGACAGGAAGAGGTTGATTGTGTTGATTGTTATCATTGCATCTGGAGCCTTGTTACTTGCATTGTGTTGCTGCTTTTACATTTTCAGCCTATTGAGATGGCGCAAAAGGCTTAAAGAAGGGGTTTCAGGGGAGAAGAAAAAGAGCCCTGCTAGGGCCAGCTCTGGAGCAAGCGGAGGTCGTGGCAGCACTGATAGCGTTGGGCCGAAACTCGTAATGTTCAACACCAAAATTACACTAGCTGAAACAATCGAAGCAACAAGGCAATTCGACGAGGAGAATGTGCTGAGCAGAACAAGGTACGGATTAGTATTCAAGGCATGTTACAACGATGGAATGGTCCTTTCAATTCGCAGGCTCCCAGATGGATCGTTGGACGAGAACATGTTCAGAAAAGAAGCTGAATCACTAGGCAAAGTCAAGCACCGAAACCTCACCGTTCTCAGAGGCTATTACGCTGGGCCACCTGACATGAGACTCCTAGCCTACGACTACATGCCCAATGGAAACCTTGCAACACTCCTCCAAGAAGCTTCTCACCAAGATGGCCATGTCCTAAATTGGCCAATGCGACACCTCATTGCACTGGGAATAGCCCGTGGCTTAGCCTTCCTACACCAATCCTCAATGGTTCATGGGGATGTGAAACCACAAAATGTACTCTTCGATGCAGATTTCGAGGCCCATTTATCAGATTTCGGGTTAGACAAGCTAACAATAGCCACCCCAGGAGAAGCCTCAACTTCAACTTCAGTTGGCACGTTGGGTTACGTATCCCCAGAAGCAGTATTAACCGGGGAAGCCACGAAGGAGTCTGATGTGTACAGCTTCGGCATCGTGTTGCTTGAGCTCCTGACAGGAAAGCGACCCGTGATGTTCACCCAAGACGAAGACATAGTGAAGTGGGTGAAAAAACAACTCCAGAGGGGTCAAATCACAGAGCTTTTAGAGCCAGGGTTGCTTGAGTTGGACCCAGAATCATCAGAGTGGGAAGAGTTCTTGCTCGGAGTGAAAGTAGGCTTGCTCTGCACGGCACCAGACCCTCTCGATCGACCAACCATGTCCGACATCGTTTTCATGCTCGAAGGCTGCCGTGTCGGCGCTGACATCCCGTCCTCCGCCGATCCAACCTCTCAACATTCTCCAGCATAA 1944 0.4722 MVLNLSGNGFSGKIPASFGNLFRLTTLDLSKQNLSGELPFELSGLPNLQAIALQENKLSGVVPEGFSSLMSLQYLNLSSNAFSGHIPENYGFLRSLLVLSLSGNLITGVIPPEIGNCSDIETLELGSNALAGHIPADLSRLTHLKVLDLSRNNLSGDMPADISKCSSLNALLVDHNHLSGDIPASLTDLSNLTMLDLSANNFSGEIPSNLSMIPGLVYFNVSGNDLEGEIPPTLGSRFNNPSAFADNQNLCGKPLDRKCEEITERDRKRLIVLIVIIASGALLLALCCCFYIFSLLRWRKRLKEGVSGEKKKSPARASSGASGGRGSTDSVGPKLVMFNTKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENMFRKEAESLGKVKHRNLTVLRGYYAGPPDMRLLAYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHGDVKPQNVLFDADFEAHLSDFGLDKLTIATPGEASTSTSVGTLGYVSPEAVLTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGADIPSSADPTSQHSPA* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0488 647 MobiDBLite consensus disorder prediction 309 332 - -
Dod02g0488 647 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 1 643 - -
Dod02g0488 647 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 643 - -
Dod02g0488 647 Gene3D Ribonuclease Inhibitor 1 262 IPR032675 -
Dod02g0488 647 Gene3D Transferase(Phosphotransferase) domain 1 430 636 - -
Dod02g0488 647 SMART serkin_6 354 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0488 647 Pfam Leucine rich repeat 23 81 IPR001611 GO:0005515
Dod02g0488 647 Pfam Leucine rich repeat 121 178 IPR001611 GO:0005515
Dod02g0488 647 SUPERFAMILY Protein kinase-like (PK-like) 333 631 IPR011009 -
Dod02g0488 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Dod02g0488 647 Pfam Leucine Rich Repeat 2 21 IPR001611 GO:0005515
Dod02g0488 647 SUPERFAMILY L domain-like 2 252 - -
Dod02g0488 647 SMART LRR_typ_2 45 68 IPR003591 -
Dod02g0488 647 SMART LRR_typ_2 141 165 IPR003591 -
Dod02g0488 647 SMART LRR_typ_2 93 117 IPR003591 -
Dod02g0488 647 SMART LRR_typ_2 189 213 IPR003591 -
Dod02g0488 647 Gene3D Phosphorylase Kinase; domain 1 328 429 - -
Dod02g0488 647 Pfam Protein kinase domain 364 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0488 647 ProSiteProfiles Protein kinase domain profile. 354 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0488 Dod-Chr2 6406670 6408613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0488 3 647 Receptor kinase-like Gene Family AT4G36180 75.000 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Dod02g0488 Pkinase 1.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0488 - - gmx:100305362 1099.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0488 02 6406670 6408613 Dod02g0488 02 6406670 6408613 ECH