Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0486 ATGATGGAGTCGATGGAGTCATGTGTCCCACCGGGGTTTCGGTTCCACCCAACGGATGAAGAGCTTGTTGGTTACTATCTGAGGAAGAAAGTTGCATCTCAGAAGATTGACCTTGACGTTATCAGAGAGATCGATCTTTATCGTATTGAACCATGGGATCTCCAAGAGAGATGCAGGATCGGGTATGAAGAGCAGAATGAGTGGTACTTCTTCAGCCACAAGGATAAGAAGTATCCAACGGGGACAAGAACCAACAGAGCCACCATGGCTGGGTTCTGGAAAGCCACGGGAAGAGACAAGGCAGTGTACGACAAGACCAAGTTGATTGGGATGAGGAAGACCCTTGTTTTCTACAAAGGGAGAGCCCCTAATGGCCAGAAAACTGATTGGATTATGCATGAGTACAGGCTTGAATCCGATGAGAATGGACCTCCACAGGAGGAAGGATGGGTTGTGTGTAGGGCTTTCAAGAAAAGAACCAATGGGCAAACGAAGACTATTGAAGGATGGGATTCAAGCTACTTCTATGACGAAGCAAGTGGGGTCAGCAATGTGGTTGACCCAATTGACCATCTCATCTCAAGGCAGCAGCATCATCAGAGCTTTTTAGCCCAAAATTTCATGTGCAAGCAAGAGATAGAAGCAGCAGATAACAGCTTGAGCTGCATGCATGCAGACCAATTTGTACAGCTTCCTCAGCTAGAAAGCCCAACTTTGCCACTAGTCAAGAGGCCAAGCACAGTGTCCCTAGTGTCAGAAAACATTAACGAAGATGACGACCAAAACAGAATAATATTATCCCACACTAACAACAACAACACAAAGAAAGTGACTGATTGGAGGGCTCTTGACAAGTTTGTGGCCTCTCAACTGAGTCAAGGGGACAGGAACGAGACTGAAGGACTTCCAAGCTTTGAAACCAATGCAAGCTCGGACATGGCATTGCTGCTACTGCAGAATAGCAGGGACATTAATGAAGGGAACAAGTTAAGCCCGTTTTTAAGTGCAAGCTCAGACTGTGATATTGGGATATGCGTGTTTGAAAAATGA 1050 0.46 MMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPPQEEGWVVCRAFKKRTNGQTKTIEGWDSSYFYDEASGVSNVVDPIDHLISRQQHHQSFLAQNFMCKQEIEAADNSLSCMHADQFVQLPQLESPTLPLVKRPSTVSLVSENINEDDDQNRIILSHTNNNNTKKVTDWRALDKFVASQLSQGDRNETEGLPSFETNASSDMALLLLQNSRDINEGNKLSPFLSASSDCDIGICVFEK* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0486 349 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Dod02g0486 349 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Dod02g0486 349 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Dod02g0486 349 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 5 327 - -
Dod02g0486 349 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Dod02g0486 349 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0486 Dod-Chr2 6365463 6370118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0486 2 348 NAC Transcription Factor Family AT2G18060 63.315 1.04e-162 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod02g0486 NAM 2.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0486 - - aprc:113869508 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0486 02 6365463 6370118 Dod02g0486 02 6365463 6370118 ECH