Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0481 ATGAAGCGGGAAAGGAAATCGAGCAGGGTTTCGTGGGCTCCTGCATCTAATCTGTGTCAGGTAAAATTGTTCTTATCTGAGGATTGCCCTTCAAAAGTTGGTCTGAAATCTCAGGATCATCTTCAAGCAAAGACATCATCAATGTTGCCTTCAAGTACCAATGAATATATCGATTTACCTCCTGGTTTTGAAGATAATCATTTCCAGAACCAGTCAAAGGCTGAACTATCTCCCATTTCTCAGATAAAATGGGAATGCCCTCCCCTGTTTACTTTGAGTCATCATTGGTGCGTTGCAGCTGGTGAAGAAAGTAGGGAGAAATTGGATCAAAAGCTAAGAGAAATGAAAGTGCTTGAAGCCGTTTATCCCCGTCTTTCTTCCATTCCTTCTAGCCCGTCTGTTTCTTATGATGTAGAGAAGGAAAATTATGACGATAACCACACTACTCTCATCTCTATCGTCCCCATTGAGGAAGAAGATTTGATGGATATTAGTAGTCCTGAAGTGGCTATCACAAAACTTTCAGACACTCCCACCAATTTGCAGTCGCTAAATTTACAGCAATATATGTCAGCTACGTCTCCCATTATTTCACAATCCAACACCTCTTCCAGTGTTCCCTTATCTTCTCATGAGAAGCCTGTGCCTGGTTCTGCTGGTGTGGACCCAGATTTAGCTGCAGCTTCTGCTCTTTTAGCTGCAGCCATCATGAAGAATAATGATCAGGGAAACCCAATTGATATGGATCTACTCGTTAAAATATTTAATGATCCAATGATGGTTGAGAAATTGGTTCACCAACATGGAATGGCAGCTGCTGCTATAACTGCGTCCTCAAATGCTGTGGCTATACCTACTACTGGGTTGAAACCTGCTTCTTTATCAGTTCCATTGTCTAAACCTGCACATGATGAGGCTGTTGTTTCTGGGCCAAAGCAAGCAACTCCCTCAGGTTCCATGTTGATGCCTACACCAAATAAGCCAGCAATTCCATCTGTTCCAGTGTTGAGGACCACACTGGATGCGCCAGCAACCCCATCAGTTCCGGTCTCTAGGCCTGTATCTGGTAAACTAGCAACTCCGTTGGTTACACTGCCCATACCACCAACTACACCTTCACCTCCACCTCCTACCACAGTTACACTTCATATGCACAGGCCTGTCAACAAAAATGTTCACCCCTTATCAAATGGTGTGGTGCCCCCTTTAGATACTCAACCTCCTCAACAAGATACAGTTATGTTATCTGGTATAAAGCGAGCAGCACCATTGCCTTCTGTTTCTTCCAGTGAGGTGAGCACAGTGCCTTTGCATTCAGCTTCTGTGAACTTGCATGCAGGTGCAAATCAGGTGCGGTCCATTGCTAGTACAGCGCCTCATCAACCGACTAATGGTTCAACATTTGCAGTGAAGGATGCCAACTATTATAAGAACCTTATTAGGCAACATGGTGCAGATGCGCAGGACTCAGTAATAGGTATCCATCATAATAACTTCCAAGACTTGAAACCGGTACATAACAACTTTAAACAAAGGGAAGTGATATACAAAAACCAGAAACCTTGCATATACTTTAATAGCTCAAGGGGTTGCCGAAATGGTTCAAATTGCCCATATCAGCATGATATGTCAGCTCAATGGGGAGCTGGTAATGTCCTTCTTGGCCAAAATGCAAAAAGAATGAAACTAGGGCCAGAAATTAATGGGAGGATATAA 1716 0.4336 MKRERKSSRVSWAPASNLCQVKLFLSEDCPSKVGLKSQDHLQAKTSSMLPSSTNEYIDLPPGFEDNHFQNQSKAELSPISQIKWECPPLFTLSHHWCVAAGEESREKLDQKLREMKVLEAVYPRLSSIPSSPSVSYDVEKENYDDNHTTLISIVPIEEEDLMDISSPEVAITKLSDTPTNLQSLNLQQYMSATSPIISQSNTSSSVPLSSHEKPVPGSAGVDPDLAAASALLAAAIMKNNDQGNPIDMDLLVKIFNDPMMVEKLVHQHGMAAAAITASSNAVAIPTTGLKPASLSVPLSKPAHDEAVVSGPKQATPSGSMLMPTPNKPAIPSVPVLRTTLDAPATPSVPVSRPVSGKLATPLVTLPIPPTTPSPPPPTTVTLHMHRPVNKNVHPLSNGVVPPLDTQPPQQDTVMLSGIKRAAPLPSVSSSEVSTVPLHSASVNLHAGANQVRSIASTAPHQPTNGSTFAVKDANYYKNLIRQHGADAQDSVIGIHHNNFQDLKPVHNNFKQREVIYKNQKPCIYFNSSRGCRNGSNCPYQHDMSAQWGAGNVLLGQNAKRMKLGPEINGRI* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0481 571 MobiDBLite consensus disorder prediction 197 220 - -
Dod02g0481 571 ProSiteProfiles Zinc finger C3H1-type profile. 516 544 IPR000571 GO:0046872
Dod02g0481 571 MobiDBLite consensus disorder prediction 304 324 - -
Dod02g0481 571 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 1 563 - -
Dod02g0481 571 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 563 - -
Dod02g0481 571 MobiDBLite consensus disorder prediction 197 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0481 Dod-Chr2 6287467 6293478 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Dod02g0481 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0481 - - adu:107488052 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0481 02 6287467 6293478 Dod02g0481 02 6287467 6293478 ECH