Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0477 ATGGCTAACAGAAAGTCCAACAAAGTGCCACAAGCTGTTGTTCTCAAGCAAATTCTCAAGAGATGCTCAAGTTTTGGGAAGAAGCAGAGCTACAATGAAGAGGGTCTTCCTGATGATGTGCCAAAAGGCCATTTTGCTGTCTATGTTGGGGAGAACAGGACCAGATACATTATCCCTATATCTTGGCTGGCTCATCCACAGTTCCAAAGTCTGCTCCAAAGAGCTGAGGAAGAGTTTGGCTTCAACCATGATATGGGACTTACCATTCCCTGTGATGAAGTTGCTTTTGAGTCCCTAACCTCAATGATAAGATAA 315 0.4381 MANRKSNKVPQAVVLKQILKRCSSFGKKQSYNEEGLPDDVPKGHFAVYVGENRTRYIIPISWLAHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVAFESLTSMIR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0477 104 Pfam Auxin responsive protein 17 103 IPR003676 GO:0009733
Dod02g0477 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Dod02g0477 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0477 Dod-Chr2 6247985 6248652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0477 5 103 Calmodulin-binding Proteins AT4G34750 43.434 2.25e-22 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0477 02 6247985 6248652 Dod08g2267 08 50623475 50623955 ECH
Dod08g2267 08 50623475 50623955 Dod02g0477 02 6247985 6248652 ECH
Dod02g0477 02 6247985 6248652 Dod02g0477 02 6247985 6248652 ECH