Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0475 ATGGAACCTCAACAGCCACAACAACAACACTTACCAAACGAGGATGGGGGCAGTGGAAAAGGGGGGTCATCATACCTGAGCAACAGGCAAAGCAGTACACGGTGGACTCCCACAACCGACCAGATAAGGATTCTGAAGGACCTTTACTACAACAATGGGATTAGATCCCCAAGTGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGCAAGATCGAAGGCAAGAATGTCTTCTACTGGTTCCAGAACCACAAGGCTCGCGAGAGGCAGAAGAAAAGGTTCACCTCTGATAGTGTCCCCATGCAAAGACCTGCCGGAGGAGCAGCAGCAACCAATAATATTAATGGTGCTTGGAAACCACCTGAAGAAACCACCATTCACAACAAGTACTCTAACATATCATCAACTGGGGTCTCTTCGTCTTCTTCTGCTGGGATGATTACTGTGGGCCAGATGGGGAATTATGGGTATGGATCTGTGCCCGTGGAGAAGAGTTTTAGGCTGGAGGCTAGCAGTGGCCATGTTGGTGGTGCCATAAACCACCATCTGGGATGGGTCGGTGTGGACCCATATTCCTCAACCTACACTTTCTTTGACAAAATAAGGCCAAATGGAGAAACCTTAGAAGAAGAACAAGAAGAGGATGATGTCCCTGATATTGAAACCCTCCCTTTGTTCCCCATGCATGGTGATGACATCCATGGCTATTGCAACCTCAAGTCTAATTCTTCTAACTATGATGGTGGTTGGTATCACACAGAAGATGGATTCAAGAACGGTTCTCGTGCTTCCTTGGAGCTCAGCCTCAACTCCTACTCCCGCAAATCTCCTGATTTCGTTTGA 852 0.4812 MEPQQPQQQHLPNEDGGSGKGGSSYLSNRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDSVPMQRPAGGAAATNNINGAWKPPEETTIHNKYSNISSTGVSSSSSAGMITVGQMGNYGYGSVPVEKSFRLEASSGHVGGAINHHLGWVGVDPYSSTYTFFDKIRPNGETLEEEQEEDDVPDIETLPLFPMHGDDIHGYCNLKSNSSNYDGGWYHTEDGFKNGSRASLELSLNSYSRKSPDFV* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0475 283 CDD homeodomain 33 95 IPR001356 GO:0003677
Dod02g0475 283 MobiDBLite consensus disorder prediction 94 120 - -
Dod02g0475 283 ProSiteProfiles 'Homeobox' domain profile. 28 94 IPR001356 GO:0003677
Dod02g0475 283 SMART HOX_1 30 98 IPR001356 GO:0003677
Dod02g0475 283 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 277 IPR044555 GO:0003700|GO:0099402
Dod02g0475 283 MobiDBLite consensus disorder prediction 1 38 - -
Dod02g0475 283 Pfam Homeodomain 32 93 IPR001356 GO:0003677
Dod02g0475 283 Gene3D - 26 93 - -
Dod02g0475 283 SUPERFAMILY Homeodomain-like 25 100 IPR009057 -
Dod02g0475 283 PANTHER PROTEIN WUSCHEL 1 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0475 Dod-Chr2 6230580 6232170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0475 29 235 Wox Gene Family AT2G17950 43.373 1.73e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod02g0475 Homeodomain 1.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0475 - - vra:106776674 395.201