Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0465 ATGGGAATCTGCTTTTCATCCACAAAAGTCAGTGGCTCCAACAGCAACAGCAACAACAACAATAACGCCACCTCCACCGCCAACCGCAACCGCAAATGGAATTCCAAGGCGGAATCCGCGGTCACCACTCCGGCGGCGGCCACCACCACCACGGCGGTGACCGTTCGCAAGCAGCAGCCGCGGAGAAACGAGGACAGGAACCAGAGGGCGAAGGAGAAGGCGAGCTCGAGGAGGCACGTGGGGCACGTGCCGTGCGGGAAGCGAACGGATTTCGGTTACGAGAAGGACTTCGACAGGAGATTCTCCCTCGGGAAGCTGTTGGGCCACGGGCAGTTCGGTTACACGTATGTCGGGATTGATAAGGCCACTGGGGATCGTGTTGCCGTTAAGAGGCTCGAGAAGGCCAAGATGGTTCTTCCCATAGCCGTTGAGGATGTTAAGCGAGAGGTCAAGATATTAAAAGAACTTGCAGGCCATGAAAATGTGGTCCAGTTCTATAATGCTTTTGAGGATGATTCATATGTTTACATAGTTATGGAGTTATGTGAAGGCGGAGAACTACTGGATAGGATATTGGCCAAGAAGGACAGCCGGTACAGTGAAAAAGATGCAGCAGTTGTTGTAAGACAGATGCTTAAGGTAGCAGCTGAGTGTCATTTACATGGTTTGGTACATCGGGACATGAAGCCAGAGAATTTTCTTTTCAAATCAACCAGAGAAGATTCACCATTAAAGGCTACAGATTTTGGGTTATCTGATTTCATAAAACCAGGAAAGAGATTTCAAGATATTGTGGGCAGTGCTTACTACGTCGCACCTGAAGTGCTAAAACGGAAGTCAGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATTACATACATATTGCTTTGTGGGAGACGCCCATTTTGGGATAAGACTGAGGATGGTATCTTCAAGGAGGTCTTACGGAACAAGCCTGATTTCCGCCGCAAACCATGGCCATCCATAAGCAATGGTGCTAAAGATTTTGTGAAGAAACTATTGGTAAAGGATCCTCGTGCAAGATTCACTGCTGCTCAGGCTCTATCACATCCATGGGTCAGAGAAGGAGGAGAGGCATTGGAGATTCCTATTGATATATCTGTCCTAAGCAACATGCGACAGTTTGTGAAGTATAGTCGATTGAAACAATTTGCACTGAGGGCGTTGGCTAGCACACTTGATGACGAAGAGTTGTCTGATCTAAAAGATCAGTTTGATGCAATAGATGTCGACAAAAATGGTTCCATTAGTCTTGAAGAGATGAGACAGGTAGCCCATTAA 1305 0.4751 MGICFSSTKVSGSNSNSNNNNNATSTANRNRKWNSKAESAVTTPAAATTTTAVTVRKQQPRRNEDRNQRAKEKASSRRHVGHVPCGKRTDFGYEKDFDRRFSLGKLLGHGQFGYTYVGIDKATGDRVAVKRLEKAKMVLPIAVEDVKREVKILKELAGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYSEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTREDSPLKATDFGLSDFIKPGKRFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNGAKDFVKKLLVKDPRARFTAAQALSHPWVREGGEALEIPIDISVLSNMRQFVKYSRLKQFALRALASTLDDEELSDLKDQFDAIDVDKNGSISLEEMRQVAH* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0465 434 Gene3D Phosphorylase Kinase; domain 1 94 186 - -
Dod02g0465 434 MobiDBLite consensus disorder prediction 1 57 - -
Dod02g0465 434 SUPERFAMILY EF-hand 387 432 IPR011992 -
Dod02g0465 434 Gene3D - 381 432 - -
Dod02g0465 434 ProSiteProfiles Protein kinase domain profile. 101 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0465 434 CDD STKc_CAMK 100 360 - -
Dod02g0465 434 ProSiteProfiles EF-hand calcium-binding domain profile. 404 434 IPR002048 GO:0005509
Dod02g0465 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Dod02g0465 434 Pfam Protein kinase domain 103 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0465 434 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE 48 431 - -
Dod02g0465 434 Gene3D Transferase(Phosphotransferase) domain 1 187 380 - -
Dod02g0465 434 SUPERFAMILY Protein kinase-like (PK-like) 99 375 IPR011009 -
Dod02g0465 434 ProSitePatterns EF-hand calcium-binding domain. 417 429 IPR018247 -
Dod02g0465 434 MobiDBLite consensus disorder prediction 1 81 - -
Dod02g0465 434 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Dod02g0465 434 MobiDBLite consensus disorder prediction 58 81 - -
Dod02g0465 434 SMART serkin_6 101 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0465 434 Gene3D - 387 401 - -
Dod02g0465 434 PANTHER SERINE/THREONINE-PROTEIN KINASE 48 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0465 Dod-Chr2 6125723 6130949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0465 1 431 EF-hand Containing Proteins AT2G17890 74.610 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod02g0465 Pkinase 8.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0465 K13412 - gmx:100817249 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0465 02 6125723 6130949 Dod02g0465 02 6125723 6130949 ECH
Dod02g0465 02 6125723 6130949 Dod05g0894 05 16260089 16266912 PCT