Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0464 ATGGGTTTCGCACAATCCTGGCTCGTGGACAGCACAAGTTTGATGCGCGTGCTCTACTCCCTCCCTCTCTTCCACTTCCGCAATCAAACCACTAACAATTTTTCGGGTACCAGATTCAGATTTTTTTTTTTTTTTTGGGTTGCAAAAATGGATCAGTGGAGGCCTCAAGATTTGTCCAAAACCGCATCCGCTGCGGCAGATTCAGCACCCTCTCACTCTCAAAACCTCCTTACTCTCACCTCTAATAATCGCTCCTCCTTCCACGTCTCCCCAGGGCAGAGCGGTGAAGTGGAAGCGGCGGGGCAGGATCCAGCTGCCGCAAGAAAAGTTCAGAAGGCTGACCGCGAGAAACTCCGGAGGGATCGACTGAACGAGCACTTCCACGACTTGGCCAGCACATTAGATCCTGATAGGCCCAGGAATGACAAGGCTACCATCCTTACGGATACAATCCAAATGCTTAAGGATTTAACCGCTGAAGTTAATAGGCTGAAAACCGAGCATAAAGCTCTGTCTGAAGAGTCACGCGAACTAATGCAAGAGAAGAATGAACTCAGAGAAGAGAAGGCTTCTTTGAAATCTGATATTGATAACCTTAATGCCCAATATCAGCAGAGGGTCAGAATCATGTTCCCATGGACTGCAATGGACCACTCTGTTGTCATGGCTCCACCTTATTCCTATCCTGTTCCTATACCTATTCCTCCTGCTCCAATGTCCATTCACCCAACTCTCCAACCCTTTCCTTTCTATGGAAATCAAAATCCTGCCCACATTCCCACTCCATGTTCAAATTATGTCCCAGTTGAGATGCCATCGGCCCAGTATGCTTCCTCATCCCACGTTCCTAGCCAAAAAGAATCCCAGAGCAAGTCACCGGGTCATAGAAAGATCGGTGATGCTGACAGGTGTAGTGAGTCTCATGATGTTGCTACAGAGCTTGAACTTAAGATGCCTGGATCATCAACACAGGAGGATTCTACTTCTGGCGGACGGAAGGGCAAGCATTCAGTGAGGAAGGATAGAATCATCGCAGATGGAAGCGCTTCAAGCCGGTATTCTCCATCTCTAGGACTTCAAGATAGCTCCAACAGTGTGGGTGACATCCCAAAGGCTGATAACTGA 1125 0.4818 MGFAQSWLVDSTSLMRVLYSLPLFHFRNQTTNNFSGTRFRFFFFFWVAKMDQWRPQDLSKTASAAADSAPSHSQNLLTLTSNNRSSFHVSPGQSGEVEAAGQDPAAARKVQKADREKLRRDRLNEHFHDLASTLDPDRPRNDKATILTDTIQMLKDLTAEVNRLKTEHKALSEESRELMQEKNELREEKASLKSDIDNLNAQYQQRVRIMFPWTAMDHSVVMAPPYSYPVPIPIPPAPMSIHPTLQPFPFYGNQNPAHIPTPCSNYVPVEMPSAQYASSSHVPSQKESQSKSPGHRKIGDADRCSESHDVATELELKMPGSSTQEDSTSGGRKGKHSVRKDRIIADGSASSRYSPSLGLQDSSNSVGDIPKADN* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0464 374 Coils Coil 147 202 - -
Dod02g0464 374 MobiDBLite consensus disorder prediction 108 124 - -
Dod02g0464 374 MobiDBLite consensus disorder prediction 275 289 - -
Dod02g0464 374 MobiDBLite consensus disorder prediction 349 374 - -
Dod02g0464 374 CDD bHLH_AtILR3_like 112 186 - -
Dod02g0464 374 Gene3D - 106 208 IPR036638 GO:0046983
Dod02g0464 374 MobiDBLite consensus disorder prediction 329 346 - -
Dod02g0464 374 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 107 157 IPR011598 GO:0046983
Dod02g0464 374 PANTHER TRANSCRIPTION FACTOR BHLH11 88 373 - -
Dod02g0464 374 MobiDBLite consensus disorder prediction 290 313 - -
Dod02g0464 374 MobiDBLite consensus disorder prediction 83 124 - -
Dod02g0464 374 Pfam Helix-loop-helix DNA-binding domain 108 157 IPR011598 GO:0046983
Dod02g0464 374 MobiDBLite consensus disorder prediction 275 374 - -
Dod02g0464 374 PANTHER TRANSCRIPTION FACTOR BHLH121 88 373 IPR044579 GO:0003700|GO:0055072
Dod02g0464 374 SMART finulus 113 163 IPR011598 GO:0046983
Dod02g0464 374 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 107 177 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0464 Dod-Chr2 6121458 6124007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0464 105 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 52.282 4.04e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod02g0464 HLH 5.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0464 - - adu:107487484 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0464 02 6121458 6124007 Dod02g0464 02 6121458 6124007 ECH
Dod03g3345 03 66116912 66119738 Dod02g0464 02 6121458 6124007 ECH