Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0434 ATGGCAGAAGACAGAGAGGAAACCTCTTCTCAAAGTTCTATATGCTTGCAAGATTCAACTTCAAGCTCCCCAATGAGTACCAAGTGCAAGCACGTGTTTGATAGATTATTTGGTTGTGCCCCTTCATGGAAGACAAACACCACACCAACTGGTAGAAGAATTTTCCACAGGGATGTGGAAAAAGAAGAGTTTCAGTATGCTAGTAGTCACTGTCTCTCATCCTACTATAGTGTGTTTGTGGTTCGGCTAGCAATCATGGTCATGCTAGCTATCTTGATAGGGCTGCTCACTATACTGACATGGCATTTCACCAAGATTTATACAACAAAATCGCTTAATAGCTTGGCTTATGGTCTGCGTTATGAGCTTCTGCAACGCCCGATCTTAAGGATGTGGAACATTCTGAATTCTACTGCTGAGATTACTACAGCTCAAGTGAAGCTGTCTCAGTATGTGATCAGACGTTACAGCAACCCTGCCTCTCAAGCAGAGCAAGTTGAGCTTTATGAAGCGATGAGGGCTGTAACGTGGGCGCTGTTTGCTAGTAGAAAAGCTCTTAACTCAATAACTATCAATTATAAGAACGGATTTGTTCAGGCGTTCCATAGAGATTTGAAGGATAACAACACATTCTACATCTATTCTGATCTTTCAAATTACTCTATGGGTGCTAGCAACTCTAATGAGGTCAATTCCTTGTTGACACATCAAGCTTGGGATGATGAGGCCATTCACGGTAACAAGTCTGCAATTTGGTACCGCGAACCGCTTGATCCTGTCACTGGTGAGAAGATTGGAAAAGCCATGCAGATTGCACCAGAAGACTTGATCAACATAGCTGGCCTCTCACAAGTACCTGATGGGGTGGCTTCGTGGCACGTCGCGGTGAGCAAGTTCACAGATTCACCTTTGCTTTCAGCAGCATTGCCAGTTTGGGACTCTTCTAATAAGAGTATTATGGCAGTTGTGGGTGTTACCACTGCACTTTATAGTGTAGGACAGCTAATGAGAGAACTAGTTGAGTTGCACAGTGGCCATATGTATTTGACTTCTCAAGAGGGTTACCTACTTGCAACTTCCACAAGTGCACCTCTGCTGACAAATTCAACAAAGCCCCCAAAGCTTAAGATGGCTGTTGACTGTGATGATGAAGTGATAAGGCTGGGAGCTGAGTCGCTACAGAGAACTTATGGGAACAATTTCCCTCCAAATCATGAGGTTCATGTGGAGAATGCTAAGCTTGGCCGCGAGCAATATTACATTGACTCATTCTTCCTGAACTTGAAGAGACTTCCTTTGGTAGGTGTAATCATCATACCAAGAAAGTATATCATGGGGCAGGTAGATGAAAGGGCCTTCAAAACTTTGGTTATTCTGATATCAGCATCATTATGCATTCTAGTCATTGGATGTGTTTGCATTTTGATACTGACAAATGGAGTATCAAAGGAAATGAAACTAAGAGCAGAACTGATTAATCAACTGGAAGCAAGAAGGAAGGCAGAGGCTTCAAGCAACTATAAAAGTCAATTTCTTGCAAACATGAGTCATGAACTGAGGACACCTATGGCAGCAGTAATTGGGTTGCTTGACATTCTTATATCAGATGACTGTCTCACAAATGAACAATATTCAACAGTTACTCAAATAAGAAAATGTTCAACCGCCCTGCTGCGTCTTCTTAACAACATCTTGGATCTGAGCAAGGTGGAATCAGGAAAACTGGTCTTAGAAGATGCAGAATTTGACTTGGGACGTGAACTTGAAGGGCTTGTAGATATGTTTTCTGTCCAGTGCATTAATCACAATGTAGAGACTGTTTTAGACCTCTCTGATGACATGCCAAAGTTAGTAAGGGGTGATTCTGCTAGGGTTGTTCAAATTTTTACAAATTTGATCAACAATTCTATTAAGTTTACTCCATCGGGTCACATTATTCTGAGAGGATGGTGTGAATACCCAGATTTTTGCGATGGCAGTCCAATTTTTCCTCTTGAGCATAAGAAATCACGGAGTGTGCTAAAGACCAGAGAGAAGCAAAATGCAGACCAGTTAAAGAGAACTAAGAGAGATAACAAAGTGATACTTTGGTTTGAAGTTGATGACACAGGCTGTGGCATCGACCCAAGCAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACAACTCGATTGCATGGAGGCACTGGTCTTGGTCTTTGCATTGTGAGAAACTTGGTTAATAAGATGGGCGGAGAAATCAAGGTTGTCAAAAAGGAGGGCCCAGGAACACTGATGCGATTATGCTTGATTCTCAGTGCACCAATGGATGTCACAGAAAAACATTGTGCATTAGATTTGACAGACAATGGCTTAGTGGTACTCCTTGCACTGCACGGCAACATGGGTCGACTAATTACATCCAACTGGTTGAAGAAAAACGGGGTGTGCGCTTTGGAAGCATCTGAGTGGAATGGACTAACACAAATTTTGAGGGAACTCTTTCATGCAAGAAGCTCAGTCCATAATAATGATTTTGATGCACATTATCTAGTAATTGAGGAATTGAAGTCTAAATTACTCAGCATGCAAGATATGAAGAACCTGGTTTTTGTCATTGTTGTGGACATTGGGATACTTGACTTGAGCACAGATATATGGAAAGAACAGCTTAATTTCCTTCACAGGTACTTTGGGAGAGCAAAGTTTGTATGGATGCTAAATCATGACACTTCCAATAATATTAAGATGGAGCTCCGTAGGAAAGGGCACGTTCTGATGGTGAATAAACCCCTTTACAAAGCAAAAATGATTCATATTTTGGAAGCTGTCATAAAGGAGAGAAATCTTGAGCCACAAAAGAAAAACATGACTGCTCCAAGGGCTACAATGAAAGAGGGTGATTTGCATGAGTTTCTTGAGATTGATTCTTCTCATTTTGATGGTGCTAGCTCTGATGATTCTGACACATCTGAAATGGTTAGTTCTAATCCTGTCAGTACAAGTGGTGATAAGCAAATTGAAGTGGTATCCATATCACACACATCATCACCATACAAGGTAAATAACTGCTTAGTTGGACTAACCAATGAATATTTGGAAGATAATAATGTGAGGAAAGAAGAGTCATTTCAGAGCAGCCCCAACTTGAATTATGCCAATGAAGACACTGAACATAAATCGCTGTCAACTAAAGAACCATCCTCGCCAACAGAATCTCAAGGCGAAGATTCTGAATGTGGGGAAACAAATAGGGTAAGCAGTTCAAGTAAAGCAGTTGATGGAAAGAAATCTCTTGAAGGCCTGAGGATATTGCTTGCAGAAGATACACCAGTGCTTCAAAGAGTAGCAACCATAATGCTTGAAAAAATGGGAGCTTCTGTTGTTGCTGTAGGTGATGGACAACATGCAGTGGATGCTCTCAGTTGCATGCTAGGTGTTGAAGACTGTAGAAGGGAGTCTCTCCAGAAGGAAAGAAACACAAGATCTCAAGCAGAGATTTTGGCTTGTCCTCCGTATGACTTGATCCTAATGGACTGTCAGATGCCGAAGATGGATGGCTACGAGGCAACAAAAGCAATCAGGAAATCAGAAGTGGGAACAGGCTTGCACATTCCCATTGTTGCCCTCACAGCTCATGCAATGTCATGTGATGAAGCCAAATGCCTGGAAGTGGGCATGGATGCTTACCTAACAAAGCCAATTGACTTCAAGCAGATGGTGTCCACCATTCTTTCACTTACTAAAAGAACATCCTGA 3750 0.4179 MAEDREETSSQSSICLQDSTSSSPMSTKCKHVFDRLFGCAPSWKTNTTPTGRRIFHRDVEKEEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTTKSLNSLAYGLRYELLQRPILRMWNILNSTAEITTAQVKLSQYVIRRYSNPASQAEQVELYEAMRAVTWALFASRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLSNYSMGASNSNEVNSLLTHQAWDDEAIHGNKSAIWYREPLDPVTGEKIGKAMQIAPEDLINIAGLSQVPDGVASWHVAVSKFTDSPLLSAALPVWDSSNKSIMAVVGVTTALYSVGQLMRELVELHSGHMYLTSQEGYLLATSTSAPLLTNSTKPPKLKMAVDCDDEVIRLGAESLQRTYGNNFPPNHEVHVENAKLGREQYYIDSFFLNLKRLPLVGVIIIPRKYIMGQVDERAFKTLVILISASLCILVIGCVCILILTNGVSKEMKLRAELINQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVRGDSARVVQIFTNLINNSIKFTPSGHIILRGWCEYPDFCDGSPIFPLEHKKSRSVLKTREKQNADQLKRTKRDNKVILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGEIKVVKKEGPGTLMRLCLILSAPMDVTEKHCALDLTDNGLVVLLALHGNMGRLITSNWLKKNGVCALEASEWNGLTQILRELFHARSSVHNNDFDAHYLVIEELKSKLLSMQDMKNLVFVIVVDIGILDLSTDIWKEQLNFLHRYFGRAKFVWMLNHDTSNNIKMELRRKGHVLMVNKPLYKAKMIHILEAVIKERNLEPQKKNMTAPRATMKEGDLHEFLEIDSSHFDGASSDDSDTSEMVSSNPVSTSGDKQIEVVSISHTSSPYKVNNCLVGLTNEYLEDNNVRKEESFQSSPNLNYANEDTEHKSLSTKEPSSPTESQGEDSECGETNRVSSSSKAVDGKKSLEGLRILLAEDTPVLQRVATIMLEKMGASVVAVGDGQHAVDALSCMLGVEDCRRESLQKERNTRSQAEILACPPYDLILMDCQMPKMDGYEATKAIRKSEVGTGLHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKQMVSTILSLTKRTS* 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0434 1249 MobiDBLite consensus disorder prediction 1063 1090 - -
Dod02g0434 1249 PANTHER TWO-COMPONENT HISTIDINE KINASE 25 1246 - -
Dod02g0434 1249 Gene3D - 1078 1247 - -
Dod02g0434 1249 CDD HisKA 508 569 IPR003661 GO:0000155|GO:0007165
Dod02g0434 1249 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 495 574 IPR036097 GO:0000155|GO:0007165
Dod02g0434 1249 Gene3D - 495 574 - -
Dod02g0434 1249 SMART REC_2 1099 1241 IPR001789 GO:0000160
Dod02g0434 1249 PRINTS Bacterial sensor protein C-terminal signature 696 710 IPR004358 GO:0016310|GO:0016772
Dod02g0434 1249 PRINTS Bacterial sensor protein C-terminal signature 731 749 IPR004358 GO:0016310|GO:0016772
Dod02g0434 1249 PRINTS Bacterial sensor protein C-terminal signature 714 724 IPR004358 GO:0016310|GO:0016772
Dod02g0434 1249 MobiDBLite consensus disorder prediction 7 26 - -
Dod02g0434 1249 MobiDBLite consensus disorder prediction 1 26 - -
Dod02g0434 1249 SUPERFAMILY CheY-like 1097 1246 IPR011006 -
Dod02g0434 1249 Gene3D - 575 772 IPR036890 -
Dod02g0434 1249 Pfam His Kinase A (phospho-acceptor) domain 508 573 IPR003661 GO:0000155|GO:0007165
Dod02g0434 1249 MobiDBLite consensus disorder prediction 984 1002 - -
Dod02g0434 1249 PANTHER OSMOSENSOR HISTIDINE KINASE 25 1246 - -
Dod02g0434 1249 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 562 767 IPR036890 -
Dod02g0434 1249 MobiDBLite consensus disorder prediction 1039 1054 - -
Dod02g0434 1249 MobiDBLite consensus disorder prediction 1036 1090 - -
Dod02g0434 1249 SMART HisKA_10 507 573 IPR003661 GO:0000155|GO:0007165
Dod02g0434 1249 MobiDBLite consensus disorder prediction 977 1002 - -
Dod02g0434 1249 Pfam Response regulator receiver domain 1101 1241 IPR001789 GO:0000160
Dod02g0434 1249 ProSiteProfiles Histidine kinase domain profile. 514 771 IPR005467 -
Dod02g0434 1249 SMART HKATPase_4 620 771 IPR003594 -
Dod02g0434 1249 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 620 767 IPR003594 -
Dod02g0434 1249 CDD REC_hyHK_CKI1_RcsC-like 1101 1241 - -
Dod02g0434 1249 ProSiteProfiles Response regulatory domain profile. 1100 1245 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0434 Dod-Chr2 5729058 5736600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0434 23 1246 Histidine Kinase Gene Family AT2G17820 64.493 0.0 1573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod02g0434 HATPase_c 2.9e-22 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0434 - - gmx:100814068 2099.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0434 02 5729058 5736600 Dod02g0434 02 5729058 5736600 ECH
Dod02g0434 02 5729058 5736600 Dod05g0162 05 2056119 2062885 PCT