Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod02g0410 | ATGGAGTTCGTGCCAAATCCGTGCCCTTTGCGTTCCTCCCTGTTCGGTTCCTTTGGGAATCTTGTTGAGAGGGTTAAGCGGATTGGTACCCTCGCAGTCTCTGCGGTTCTTGGGAACATCTTCTCTGCGATCTTGACCTTCTGCTTCGCATTAGTGGGCACTTTGTTGGGGGCTATGACTGGAGCTTTGATAGGCCAAGAGACTGAGAGTGGCTTCATTCGAGGTGCTGCTGTTGGTGCCATTTCTGGAGCTGTTTTCTCCATTGAAGTGTTTGAATCCTCTCTTGTTCTTTGGCAGTCTGATGAGTCTGGGATTGGTTGTCTCTTATACCTGATTGATGTTATTGCTAGCTTATTGAGTGGGAGACTAGTGCGTGAGAGGATAGGTCCAGCCATGTTGAGTGCTGTCCAAAGTCAGATGGGTGCTGTTGAAACCACGTTTGATGAGGTTCAAAACATCTTTGACACGGGTGGTGCAAAGGGTTTATCCGGTGACTTGGTTGAAAGAATCCCGAAAATCAAAATTACTAGTGACAACAATGTTGATGCTTCTGGTGAAAGAGTTTCTTGTTCAGTTTGCCTCCAGGACTTTCAGCTTGGCGAGATAGTTAGAAGCTTGCCTCATTGTCATCACATGTTTCACCTACCTTGCATAGATAAGTGGCTATTCAGGCATGGTTCTTGCCCATTATGCAGAAGGGATCTGTAA | 708 | 0.4661 | MEFVPNPCPLRSSLFGSFGNLVERVKRIGTLAVSAVLGNIFSAILTFCFALVGTLLGAMTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVETTFDEVQNIFDTGGAKGLSGDLVERIPKIKITSDNNVDASGERVSCSVCLQDFQLGEIVRSLPHCHHMFHLPCIDKWLFRHGSCPLCRRDL* | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod02g0410 | 235 | SUPERFAMILY | RING/U-box | 189 | 235 | - | - | |
Dod02g0410 | 235 | CDD | RING-H2_PA-TM-RING | 190 | 232 | - | - | |
Dod02g0410 | 235 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 1 | 12 | 235 | - | - | |
Dod02g0410 | 235 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 151 | 235 | IPR013083 | - | |
Dod02g0410 | 235 | SMART | ring_2 | 190 | 231 | IPR001841 | - | |
Dod02g0410 | 235 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 12 | 235 | IPR044523 | - | |
Dod02g0410 | 235 | Pfam | Ring finger domain | 189 | 232 | IPR001841 | - | |
Dod02g0410 | 235 | ProSiteProfiles | Zinc finger RING-type profile. | 190 | 232 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod02g0410 | Dod-Chr2 | 5526077 | 5528089 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod02g0410 | 20 | 235 | C3H Transcription Factor Family | AT5G66070 | 78.241 | 1.41e-119 | 338 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod02g0410 | - | - | gmx:100807641 | 431.409 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod02g0410 | 02 | 5526077 | 5528089 | Dod05g0133 | 05 | 1795904 | 1798463 | PCT |