Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0399 ATGATGAAAGCAATGATAGCAACCTCGTTTGATGTCTCCGGCGCTTGTTCCCCTGCCCTTCCTTCACGTCCTTCTTCCCTCCTCTGCCTATGCTCTCCGAATGTGTACCACACCAGGCCTTCATGTGTAAAGCCACTCAACTCTTACAAGGGACCTAGTAGAAGCATTAGTGTTGAACCCAAGTTCCAAAAATTCCGGTGGAGGGAAGCTGCGGCGAATGGGAACTTGGAGGCTATTGGAGTTCCAACTTCGGTGCCCGTGCGTGTAGCACACGAGCTTCTTCTAGCTGGCCATCGCTATTTGGATGTCAGGACTCCAGAAGAGTTCAATGCTGGACACGCTTCTGGCGCAATTAACATACCTTACATGTTCAGAGTTGGATCAGGGATGACAAAGAACACCGACTTCCTTAGCGAGGTCTCCTCACATTTCAGGAAAGATGATGAAATTATTGTTGGGTGTCAGCTTGGTAAAAGGTCTATGATGGCTGCTAGTGACTTATTAGCTGCTGGGTTCACTGGAGTCACTGACATAGCCGGTGGTTTTGCTGCTTGGACCCAGAATGGACTTCCAACTGAACTGTGA 585 0.4906 MMKAMIATSFDVSGACSPALPSRPSSLLCLCSPNVYHTRPSCVKPLNSYKGPSRSISVEPKFQKFRWREAAANGNLEAIGVPTSVPVRVAHELLLAGHRYLDVRTPEEFNAGHASGAINIPYMFRVGSGMTKNTDFLSEVSSHFRKDDEIIVGCQLGKRSMMAASDLLAAGFTGVTDIAGGFAAWTQNGLPTEL* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0399 194 SMART rhod_4 84 191 IPR001763 -
Dod02g0399 194 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 80 192 IPR036873 -
Dod02g0399 194 ProSiteProfiles Rhodanese domain profile. 94 194 IPR001763 -
Dod02g0399 194 Pfam Rhodanese-like domain 100 187 IPR001763 -
Dod02g0399 194 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 2 193 - -
Dod02g0399 194 Gene3D - 71 193 IPR036873 -
Dod02g0399 194 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 2 193 - -
Dod02g0399 194 CDD RHOD 101 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0399 Dod-Chr2 5355986 5358743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0399 84 191 Sulfurtransferasese or Rhodanese AT5G66170 47.273 6.89e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0399 - - aprc:113868825 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0399 02 5355986 5358743 Dod05g0125 05 1737465 1740875 PCT