Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0385 ATGGCTTGCCTGAGCCACCACCGCCACCGCTGGGTCCCTCACCCACCCGACATGCTCTCCGGAGAACACCTGTCCCTCCACCACCACCACCGCCACCACCGTCTCCACGACGGTGGCGACGATGACGACGACGACGGCGACGGCGGTCCCAAGTGCAGCCCTTCCCTCCCTTCTTCTTCGTATCGATTAGAGAAAGTGTTCCCCGTTTACGCCATGTGCGTGCCCGACCCGGATTCCGGATCCGTATTAGACGGGTCTGACCCGATTTGGGACGCTGTCACACAAGAAGCTAAGTTGGAGGCAGAAAAGGAGCCAATTTTGAGCAGCTTCTTGTATGCTAGTATTCTATCGCATGATTGCTTGGAGCAAGCGTTGGCGTTTGTCATTGCCAATCGCCTCCAAAGTCCTACTCTTTTGGCTACTCAGCTGATGGATATATTTTGCAATGTGATTTTGCATGACAAAGATATCCAGCGATCGATTCGCCTTGATGTCCAAGCATTCAAAGATAGGGACCCTGCTTGTTTGTCATATTGCTCAGCGATTTTGTATATGAAGGGTTACCATTCTCTGCAAGTGCATCGAGTAGCCCATGCATTGTGGCGCCAGGGACGCAAAATCTTGGCCTTGGCTTTGCAAAGTCGAGTTAGTGAGGTTTTAGGGGTTGACATTCATCCTGCTGCGAAAATTGGGGAGGGGATTTTATTAGATCATGGGACAGGCGTGGTTATTGGTGAAACTGCTATTATTGGAAACAGAGTTTCATTAATGCATGGTGTAACATTAGGAGGCTCAGGAAAGGAAACAGGTGACCGCCATCCCAAGGTAGGTGAAGGTGTGCTAATTGGAGCTGGCGCAACTATACTTGGGAATATAAGAATTGGTGAAGGTTCGATGATTGCTGCTGGATCCCTCGTGTTAAAAGAGGTCCCTCCCCACAGCATTGTGGCGGGAATACCAGCAAATGTTATTGGAGGTCTACGTGAGCGTGATCCATCTTTAACCATGAAGCATGATGCTACAAAAGATTTTTTCACACATGTAGCTGCTAACTTTAAAGAAGGAAAGCCCAATGGAGCACGGAATCCAGATAGAAATGATGTGAGCAATTGA 1113 0.4924 MACLSHHRHRWVPHPPDMLSGEHLSLHHHHRHHRLHDGGDDDDDDGDGGPKCSPSLPSSSYRLEKVFPVYAMCVPDPDSGSVLDGSDPIWDAVTQEAKLEAEKEPILSSFLYASILSHDCLEQALAFVIANRLQSPTLLATQLMDIFCNVILHDKDIQRSIRLDVQAFKDRDPACLSYCSAILYMKGYHSLQVHRVAHALWRQGRKILALALQSRVSEVLGVDIHPAAKIGEGILLDHGTGVVIGETAIIGNRVSLMHGVTLGGSGKETGDRHPKVGEGVLIGAGATILGNIRIGEGSMIAAGSLVLKEVPPHSIVAGIPANVIGGLRERDPSLTMKHDATKDFFTHVAANFKEGKPNGARNPDRNDVSN* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0385 370 Pfam Bacterial transferase hexapeptide (six repeats) 273 306 IPR001451 -
Dod02g0385 370 Pfam Serine acetyltransferase, N-terminal 89 192 IPR010493 GO:0005737|GO:0006535|GO:0009001
Dod02g0385 370 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 282 310 IPR018357 GO:0016740
Dod02g0385 370 SUPERFAMILY Trimeric LpxA-like enzymes 84 337 IPR011004 -
Dod02g0385 370 Gene3D serine acetyltransferase, domain 1 73 222 IPR042122 -
Dod02g0385 370 Gene3D Hexapeptide repeat proteins 223 351 - -
Dod02g0385 370 PANTHER SERINE ACETYLTRANSFERASE 59 353 - -
Dod02g0385 370 TIGRFAM cysE: serine O-acetyltransferase 161 321 IPR005881 GO:0005737|GO:0006535|GO:0009001
Dod02g0385 370 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 59 353 - -
Dod02g0385 370 MobiDBLite consensus disorder prediction 29 57 - -
Dod02g0385 370 CDD LbH_SAT 220 320 IPR045304 -
Dod02g0385 370 SMART SATase_N_2_a 89 193 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0385 Dod-Chr2 5161166 5165464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0385 63 359 Miscellaneous Gene Families AT2G17640 71.906 3.33e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0385 K00640 - gmx:100775449 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0385 02 5161166 5165464 Dod02g0385 02 5161166 5165464 ECH
Dod02g0385 02 5161166 5165464 Dod05g0112 05 1596565 1601241 PCT