Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0382 ATGGCAACTTCATCACCTCACACTCGCCTCCTCCACAACCCCACCAACCTCACCAGCCCCCATCACACCAACCCCTTCCCCCCCACCATCATCCGCACCCCCACTGCCACCTCCGTCAAACCCATCTCCATCAAATGCTCCGCCACAACCCAAACCCACGCGCCGCCACCACCACCACCCTCTTCCACCCAATCCCAAGATCGCGTCTTCAACTTCGCCGCCGGCCCCGCCACCCTCCCGGAAAACGTCCTCCTCAGGGCCCAATCTGAGCTCTACAACTGGCGCGGCTCAGGAATGAGCGTCATGGAGATGAGCCACAGGGGAAAAGAATTCCTCTCAATAATCCAAAAAGCTGAGTCAGATCTCCGCACCCTCTTGAACATCCCGCCGGAATATTCCGTCCTCTTCCTCCAGGGCGGCGCCACCACCCAATTCGCCGCCGTCCCCTTAAACCTCTGCACCCCTGAAGACACCGTTGATTACATCGTCACCGGTTCTTGGGGCGACAAGGCCTTCAAGGAGGCTCAGAAGTACTGCAAACCCAAGGTGATCTGGTCTGGGAAATCTGAAAAGTATACAAAGATTCCATCTTTTTCTGATTTGGAGCAAACCCATGATGCCAGGTATTTGCATATTTGTGCAAATGAGACAATTCATGGGGTTGAGTTCAAGGATTACCCTAACCCTAAGAATGATAAGGGTATTCTTGTTGCTGACATGTCATCAAATTTCTGTTCCAAGCCTGTGGATGTGTCTAGGTTTGGTGTGATCTATGCTGGTGCACAGAAGAATGTGGGGCCCTCTGGTGTCACCGTTGTGATCATAAGGAAGGATCTGATTGGTAGTGCTCAGGGTGTCACTCCTGTGATGCTTGATTTCAAGATCCATGATGAGAACAATTCTCTGTATAATACCCCTCCTTGTTATGGGATTTACATGTGTGGTTTGGTTTTTGAGGACTTGTTGGATCAAGGTGGGTTGGTGGAGGTTGAGAAGAAGAACAAGAAGAAGGCTGAGATTCTTTATAACGCTATTGATGAGAGCAAAGGGTTCTATAGGTGCCCTGTTGAGAAGTCAGTGAGGTCATTGATGAATGTTCCTTTCACTTTGGAGAAGTCTGAGTTGGAGGCTGAGTTCATCAAGGGGGCTGCTAAGGAGAAGATGGTTCAGCTCAAGGGGCATAGATCAGTTGGAGGTATGAGGGCCTCCATTTACAATGCTATGCCCTTGGCTGGTGTTGAGAAGTTGGTGGCTTTCATGAAGGATTTCCAAGCCAGGCATGCTTAA 1287 0.5051 MATSSPHTRLLHNPTNLTSPHHTNPFPPTIIRTPTATSVKPISIKCSATTQTHAPPPPPPSSTQSQDRVFNFAAGPATLPENVLLRAQSELYNWRGSGMSVMEMSHRGKEFLSIIQKAESDLRTLLNIPPEYSVLFLQGGATTQFAAVPLNLCTPEDTVDYIVTGSWGDKAFKEAQKYCKPKVIWSGKSEKYTKIPSFSDLEQTHDARYLHICANETIHGVEFKDYPNPKNDKGILVADMSSNFCSKPVDVSRFGVIYAGAQKNVGPSGVTVVIIRKDLIGSAQGVTPVMLDFKIHDENNSLYNTPPCYGIYMCGLVFEDLLDQGGLVEVEKKNKKKAEILYNAIDESKGFYRCPVEKSVRSLMNVPFTLEKSELEAEFIKGAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQARHA* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0382 428 Gene3D - 81 323 IPR015421 GO:0003824
Dod02g0382 428 CDD PSAT_like 70 424 IPR022278 GO:0004648|GO:0006564
Dod02g0382 428 SUPERFAMILY PLP-dependent transferases 67 425 IPR015424 -
Dod02g0382 428 ProSitePatterns Aminotransferases class-V pyridoxal-phosphate attachment site. 254 273 IPR020578 -
Dod02g0382 428 MobiDBLite consensus disorder prediction 1 33 - -
Dod02g0382 428 PIRSF SerC 63 428 IPR022278 GO:0004648|GO:0006564
Dod02g0382 428 MobiDBLite consensus disorder prediction 48 67 - -
Dod02g0382 428 TIGRFAM serC_1: phosphoserine transaminase 69 427 IPR022278 GO:0004648|GO:0006564
Dod02g0382 428 Gene3D Aspartate Aminotransferase, domain 1 324 428 IPR015422 GO:0003824
Dod02g0382 428 PANTHER PHOSPHOSERINE AMINOTRANSFERASE 35 428 IPR022278 GO:0004648|GO:0006564
Dod02g0382 428 Pfam Aminotransferase class-V 69 416 IPR000192 -
Dod02g0382 428 PANTHER PHOSPHOSERINE AMINOTRANSFERASE 1, CHLOROPLASTIC 35 428 - -
Dod02g0382 428 Hamap Phosphoserine aminotransferase [serC]. 67 427 IPR022278 GO:0004648|GO:0006564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0382 K00831 - fve:101302583 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0382 02 5143076 5144362 Dod05g0024 05 488182 490814 PCT