Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0381 ATGGTGCTTTCTGATGAGAACAGTTCTAACTCAATCAACCTCACAAATATCCAAGGAGGGTTGGATTATATGGGTACCAGAAAAGTTGGGCAGAACAGAAGAGCGTTAAGCGTGATCAATCAGAATCTGGTGGTGGAAGGAAGACCTTATCCTTGTGTTGTTAACAAGAGGGCATTGTCAGAAAAACATGAAGTTTGTGAGAAGAAGCAGGCGGATCCGGTGCACCGACCCATCACAAGGAGGTTTGCTGCACAAATTGCCAGCACACAGCAATCTCGGGCTGAGGAAACCAAGCGGTCAAACTTGTCCATTTCAAATTCGAATAGGTTTGGAGAGTGTATACTAATTGATGATGAACACAAGTCAATGGAGGACCAGCCAGTGCCCATGTCTCCAGAGCTAACAGAACCAATGCACAGTGAACTAGATCAGATGGAGGAAGTTGAGATGGAGGATATAGTTGTTGATGAGCCTCTTTTGGACATAGATAGCTGTGATGTCAATAATCCTTTTGCAGTTGCGGACTATATTGAAGAGCTTTATGCCCACTACAGAAAAATGGAGGGTACTGGTTGTGTCTCACCGAATTATATGGCACAACAATTTGACATTAACGAAAGGATGAGGGCTATACTGATTGACTGGCTAATTGAGGTTCATGACAAATTTGACCTCATGCACGAGACATTGTTCCTTACTGTTAATCTTATAGATAGATTTTTGGCGAAGCAGACAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTGGTTGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTCCCTGTGGTCGGGGATCTAATCCTTATATCAGACAAAGCATACACAAGATATGAAGTTCTGGAAATGGAGAAGTTGATGCTCAACACATTGCAGTTTAACATGTCTGTGCCAACGGCATATGTTTTTATGAAAAGGTTCCTAAAGGCAGCTCAAGCAGACAGAAAGCTTGAGCAGCTAGCTTTCTTCTTGGTAGAGCTATCTCTAGTGGAGTATGAGACGCTTAAGTTCCCACCATCTTTGCTAGCTGCAGCTGCAGTCTATACGGCTCAATGCACCATCTATGGTTTCAAACAGTGGAGTAAGACATGTGAATGGCACACAAACTACACACAAGATCAGCTGTTAGAATGCTCTAGCATAATGGTTGGTTTCCACCAGAAGGCTGGGACAGGGAAGCTTACAGGGGCACATAGGAAGTACTGCTCATCCAAATATAGCTACACTGCAAAATGTGAACCAGCAAGTTTTCTTGTGGATAACTCATTGTTGTAG 1302 0.4332 MVLSDENSSNSINLTNIQGGLDYMGTRKVGQNRRALSVINQNLVVEGRPYPCVVNKRALSEKHEVCEKKQADPVHRPITRRFAAQIASTQQSRAEETKRSNLSISNSNRFGECILIDDEHKSMEDQPVPMSPELTEPMHSELDQMEEVEMEDIVVDEPLLDIDSCDVNNPFAVADYIEELYAHYRKMEGTGCVSPNYMAQQFDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLAKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRYEVLEMEKLMLNTLQFNMSVPTAYVFMKRFLKAAQADRKLEQLAFFLVELSLVEYETLKFPPSLLAAAAVYTAQCTIYGFKQWSKTCEWHTNYTQDQLLECSSIMVGFHQKAGTGKLTGAHRKYCSSKYSYTAKCEPASFLVDNSLL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0381 433 Pfam Cyclin, N-terminal domain 180 305 IPR006671 -
Dod02g0381 433 ProSitePatterns Cyclins signature. 209 240 IPR006671 -
Dod02g0381 433 Gene3D - 180 419 - -
Dod02g0381 433 CDD CYCLIN 305 392 IPR013763 -
Dod02g0381 433 PIRSF Cyclin_A_B_D_E 7 432 IPR039361 -
Dod02g0381 433 SUPERFAMILY Cyclin-like 306 424 IPR036915 -
Dod02g0381 433 CDD CYCLIN 208 297 IPR013763 -
Dod02g0381 433 SUPERFAMILY Cyclin-like 168 304 IPR036915 -
Dod02g0381 433 Pfam Cyclin, C-terminal domain 307 422 IPR004367 -
Dod02g0381 433 PANTHER CYCLIN-B2-1 22 427 - -
Dod02g0381 433 Gene3D - 193 305 - -
Dod02g0381 433 PANTHER CYCLINS 22 427 IPR039361 -
Dod02g0381 433 SMART Cyclin_C_2 307 424 IPR004367 -
Dod02g0381 433 SMART cyclin_7 214 298 IPR013763 -
Dod02g0381 433 SMART cyclin_7 311 393 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0381 Dod-Chr2 5125440 5128827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0381 1 428 Core Cell Cycle Gene Families AT1G20610 58.621 3.74e-176 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0381 K21777 - gmx:100779889 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0381 02 5125440 5128827 Dod02g0381 02 5125440 5128827 ECH