Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0378 ATGGAGAACACATCTTCCAACAAGGGCAACAACACTGGGTCCCCATCCACTTCCCCACAGCACCCTTCTTCATCACCCACCAGTGACGAACCACACTCCATTTTGAAATCCCCTGAGGAAGTGCTTGCGGATTTAACAACCAGTGACATTGACAACAATAGTGGAGAAGAAGGCCAAAGTGGCAGTGGCGTTGGATCCATGATGGCCATGGTGGGCGTTGGCGGTGGTGGCGGCGGCGTGGTTGTTGTTGGTGGGGGTGTAGGGCCTGCTGTTGGGGATGTGGGTGGTGCAGCAAAGAAGAGGAAGGCCTCTGCAGTTAAGGACCCTCCGACGGGCACCCCTACTTGCCCTGTCTGCAACAGGACCTTCTCAAGTTGGAAGGGTGCATTCGGCCACATGCGCAAGCACCCTGATCGTGACTACCGTGGCTTCTTCAGGCCTCCTACTTTCTCATCCTCCTCTTCCAAAACTGTTGCTGGTGGTGCTAGTAGTCAGGTTGCAGGAGAAGGTGGTAGTTCTGGGCAGGGCAAGAGCGGCGAGGGTGGATCATCATCACCACCAGTTCGAGGGCTTGTGTTTGATTTGAACCAGCCGGTGGAGGATGCAGGAAATCTAGAAGAGAATAATGTTGATGAGGGCAACAAGTTAGGGTTTGATTTGAACGAGTTTCCTGCTACTGAAGAAGATGATGAAGACAAGTCCTAA 705 0.5319 MENTSSNKGNNTGSPSTSPQHPSSSPTSDEPHSILKSPEEVLADLTTSDIDNNSGEEGQSGSGVGSMMAMVGVGGGGGGVVVVGGGVGPAVGDVGGAAKKRKASAVKDPPTGTPTCPVCNRTFSSWKGAFGHMRKHPDRDYRGFFRPPTFSSSSSKTVAGGASSQVAGEGGSSGQGKSGEGGSSSPPVRGLVFDLNQPVEDAGNLEENNVDEGNKLGFDLNEFPATEEDDEDKS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0378 234 MobiDBLite consensus disorder prediction 46 61 - -
Dod02g0378 234 MobiDBLite consensus disorder prediction 147 182 - -
Dod02g0378 234 PANTHER TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE 10 233 - -
Dod02g0378 234 ProSitePatterns Zinc finger C2H2 type domain signature. 116 136 IPR013087 -
Dod02g0378 234 MobiDBLite consensus disorder prediction 1 32 - -
Dod02g0378 234 MobiDBLite consensus disorder prediction 1 71 - -
Dod02g0378 234 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 10 233 - -
Dod02g0378 234 MobiDBLite consensus disorder prediction 136 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0378 Dod-Chr2 5089933 5091424 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0378 110 158 C2H2 Transcription Factor Family AT4G35280 46.154 1.51e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod02g0378 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0378 - - adu:107487295 139.428