Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0377 ATGGGGAAGAAATCTTCCAACAAGGGCAAAAAGCCCACCTCTGCTCCCGCCACTAGGTCCAGGTCCAAATCCAAATCCAAATCCCCTGAAAGCTCTCCTTCTGCCACCAATGATGTGAACTTTGGTGGTGAGGGATGGGGGGAAAACCCACCACTGTTGAAAACCCCAAAGGAAGTGCTGGCTGAACTGACAACCAGCGACAATGAAAACAGTGGTGGGAGTCCCCCTCCTCCTTGTCCTTCTCCCACTGCTGTGCGAGAAGGTCAGAGTAGTGGTGGTGGTGGTGGTGGTGTTGCATCCATGATAGCCATAGCCAGTGCAGTGGCCATGGCCAATGCAGTAGCCATCGCCGCAGGCAGCGGTGGCCCTGTAATCGTTGGGGCCAGCGTAGGGCCTGCTGTTGCTGGGGCTGTCAGGAAGAAGAGAAGGAGTTCCGCTGTGAAGAACCCTCCCTCAGGCATCCCAACATGTCCCATTTGCTTCAAGACCTTCGCCAGTTGGAAGGGTGCATTTGGCCACATGCGCAAGCACCCTGAACGTGACTACCGTGGCTTCTTCAAGCCTCCTACTTTCTCATCATCCTTCTCTTCCACCACCGCTGGTGTTGCAGGTGAAGATATCAGCGCTGTGCTGGGTAGCGGAGAGGGTGGATCGGGTTCATCACCTGTTGGAGGGCTTGTGTTTGATCTGAACATTCCGTTGGATGATGCTTCCGATGAAGAGAATGATGGCAATGAAGGGAACAGAGTAGGGTTTGACTTGAACGAGTTTCCTGCAACTGATGACGAGGAAGAAGAAGACGAGGCTGCCTAA 813 0.54 MGKKSSNKGKKPTSAPATRSRSKSKSKSPESSPSATNDVNFGGEGWGENPPLLKTPKEVLAELTTSDNENSGGSPPPPCPSPTAVREGQSSGGGGGGVASMIAIASAVAMANAVAIAAGSGGPVIVGASVGPAVAGAVRKKRRSSAVKNPPSGIPTCPICFKTFASWKGAFGHMRKHPERDYRGFFKPPTFSSSFSSTTAGVAGEDISAVLGSGEGGSGSSPVGGLVFDLNIPLDDASDEENDGNEGNRVGFDLNEFPATDDEEEEDEAA* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0377 270 MobiDBLite consensus disorder prediction 1 96 - -
Dod02g0377 270 MobiDBLite consensus disorder prediction 230 270 - -
Dod02g0377 270 PANTHER TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE 17 268 - -
Dod02g0377 270 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 17 268 - -
Dod02g0377 270 MobiDBLite consensus disorder prediction 7 39 - -
Dod02g0377 270 ProSitePatterns Zinc finger C2H2 type domain signature. 157 177 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0377 Dod-Chr2 5082337 5083302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0377 149 191 C2H2 Transcription Factor Family AT4G35280 48.837 1.40e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod02g0377 None None None