Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0372 ATGGGTCTTTGCTTTGCTTCACTAGCTGCTGCTGCCCATCATGAACCACACTCCACCCTCAACACAACTCACCATTCAGGTTCAGATGAGATCAGTAAGAACGCGGCATCATCATCCGACAGGACTAGCAGCCTTGGGAACAGTCTATTTTCTGAGATATCGAGTGGGAGTGTTAATGGATCCACTTCCACCATTGTGACTCATAGTGGGCAGATCCTTGAAACGGCGAACTTGAAGGTGTTCAGCTTTGCGGATTTGAAAGCTGCAACGAGGGGTTTCAAGTGTGATGCATTGCTTGGTGAAGGTGGATTTGGCAAGGTTTACAAAGGTTGGTTGAATCAGAGGACACTGTCTCCGGCAAAAGCTGGTTCTAGCATGGTGGTCGCCATCAAAAAATTGAACCCCGAAAGCGTGCAAGGCTTTCAAGAGTGGAAGTCAGAAATCAACTTTTTGGGAAAGATTTCTCACCCAAACCTGGTCAAGCTATTGGGTTACTGTTGGGAAAATGCCGAGCTTCTCCTTGTGTACGAGTTCATGCTAAAGGGCAGCTTGGAGAATCATCTATTCAGAAGAAATCCCAACATAGAGCCACTTTCTTGGAACACCCGCCTCAAAATAGCTATGGATGCAGCTCGTGGATTGGCTGTCTTGCACACTTCAGAAAAGCAAGTCATATACAGAGATTTCAAGGCATCAAACATATTACTTGATGGGGATTACAATGCAAAAATATCAGATTTTGGCTTGGCTAAATTGGGGCCTTCTGGGGGAGATTCACACGTGACCACCAGGGTCATGGGCACCTATGGCTATGCTGCCCCAGAATACATGGCTACTGGCCACTTGTATGTGAAGAGTGACGTGTATGGCTTTGGTGTAGTCCTGCTTGAGATGATGACAGGCTTGAGAGCAGTTGATCCAAAGCGACCAGCAGAGCAGCAGAATCTGGTTCTATGGGCTAAGCCTTTTCTCTCTGACAAAAGAAGCCTTAAAACCATCGTGGATTCGAGGATGGAGGGCCAATATTCACTCAAGGCGGCACTCCAAGCAGCACAACTTACTCTATCATGCCTTCAACCTGACCCCAAAATACGACCTTGTATGCAAGATGTGCTCAAGACATTGGAAGGCATTGCAGGTATCAAACATAAAATGAAGGGTTCCAAGAAAAGAAGACATGCTTAG 1185 0.465 MGLCFASLAAAAHHEPHSTLNTTHHSGSDEISKNAASSSDRTSSLGNSLFSEISSGSVNGSTSTIVTHSGQILETANLKVFSFADLKAATRGFKCDALLGEGGFGKVYKGWLNQRTLSPAKAGSSMVVAIKKLNPESVQGFQEWKSEINFLGKISHPNLVKLLGYCWENAELLLVYEFMLKGSLENHLFRRNPNIEPLSWNTRLKIAMDAARGLAVLHTSEKQVIYRDFKASNILLDGDYNAKISDFGLAKLGPSGGDSHVTTRVMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEMMTGLRAVDPKRPAEQQNLVLWAKPFLSDKRSLKTIVDSRMEGQYSLKAALQAAQLTLSCLQPDPKIRPCMQDVLKTLEGIAGIKHKMKGSKKRRHA* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0372 394 Pfam Protein tyrosine and serine/threonine kinase 95 375 IPR001245 GO:0004672|GO:0006468
Dod02g0372 394 MobiDBLite consensus disorder prediction 16 40 - -
Dod02g0372 394 CDD STKc_IRAK 99 378 - -
Dod02g0372 394 SUPERFAMILY Protein kinase-like (PK-like) 70 376 IPR011009 -
Dod02g0372 394 Gene3D Phosphorylase Kinase; domain 1 67 178 - -
Dod02g0372 394 PANTHER OS01G0588500 PROTEIN-RELATED 45 388 - -
Dod02g0372 394 MobiDBLite consensus disorder prediction 21 40 - -
Dod02g0372 394 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 45 388 - -
Dod02g0372 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Dod02g0372 394 ProSiteProfiles Protein kinase domain profile. 93 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0372 394 ProSitePatterns Protein kinases ATP-binding region signature. 99 132 IPR017441 GO:0005524
Dod02g0372 394 Gene3D Transferase(Phosphotransferase) domain 1 179 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0372 Dod-Chr2 5014261 5018066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0372 79 375 Glycoside Hydrolase AT3G07070 49.329 1.06e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod02g0372 PK_Tyr_Ser-Thr 7.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0372 - - gmx:100794193 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0372 02 5014261 5018066 Dod02g0372 02 5014261 5018066 ECH