Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0371 ATGCTTCAAAACCCCCCATTCATTAGTCTTATTAGTCATGGTATCTTCAACTCCTCTTCCATGGATTCCACCTTGCTGACCAGCCTCTTAGTCTTCAACAACACCATCCAACAAGAGTTGATAAGGAGTGTGCATGTGTATCGAGTATCAATGGATGGGGTGGAAAGGGAAGTTGAGAGGGAGTTTGTGTTTTCGGAGAGTGGCTCCTATGTGGAAATGCAGGCTACCCCAATTCTCTCATCACTGAATTTTTGTGCTCCTGAAGTCTCTGAAGGGTACCAGAATGGGGTATGGCTTTGCATCTTTGCGTTTCACTCTGATCACAGGCCTCAATTTTCACACATTCCTTCACTGTTGTTGGCCACCAGAAACCCAAAACTTCAGACAATTCCAAACTTGCTTAATGATCTCCATATTATATACAAGCTGGGCTTGAAGGCAGAAGACAAAGAAGATCCTCTAGATTCTCCACAGGAAGAATTGCAAGGAGACAGCAATGATTGCTTACCACAGCAGAAAGTCTTGCCTGTGTTTCATCAGGATCTAAATTGTCTTCCTTTTGGTGAAGACATGACTGAGTTCGTGAACAATGAGATAAATGATGAAAGCTCACCAGGTTTGGCAGCGAAGAAAAAGAGGGCACCTAGTGATCACATTGCAAAACTTGCTTTATCAGACTTGGTCAAGTACTTTGATATCCCAATTGTAGAAGCATCAAGAAATCTGAATGTTGGGCTTACAGTTCTCAAGCGAAAGTGCAGAGAATTCGGCATTCCCCGCTGGCCTCATAGGAAAATCAAATCTCTTGACAGTCTCATTCATGATCTTCAGGAAGAAGCAAAAAACCAGGAACCGAAGGACAAGGCTGCGGCCATGGCCGTGGTGAAGAGGCAAAGGATGTTGGAGAGCGAAAAGGAAAACATAGAGAAGAAACCCTTCATGGACATTCAAAATGAGACCAAGAGATTCAGGCAGGATGTCTTCAAAAGAAGGCACAGAGCTAGAGCTATTGAGAAACAGAGTTCTGCACTCTCCAACACTTAA 1044 0.4368 MLQNPPFISLISHGIFNSSSMDSTLLTSLLVFNNTIQQELIRSVHVYRVSMDGVEREVEREFVFSESGSYVEMQATPILSSLNFCAPEVSEGYQNGVWLCIFAFHSDHRPQFSHIPSLLLATRNPKLQTIPNLLNDLHIIYKLGLKAEDKEDPLDSPQEELQGDSNDCLPQQKVLPVFHQDLNCLPFGEDMTEFVNNEINDESSPGLAAKKKRAPSDHIAKLALSDLVKYFDIPIVEASRNLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHDLQEEAKNQEPKDKAAAMAVVKRQRMLESEKENIEKKPFMDIQNETKRFRQDVFKRRHRARAIEKQSSALSNT* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0371 347 Pfam RWP-RK domain 222 269 IPR003035 -
Dod02g0371 347 ProSiteProfiles RWP-RK domain profile. 204 289 IPR003035 -
Dod02g0371 347 PANTHER PROTEIN RKD4 30 341 IPR044607 GO:0003700
Dod02g0371 347 PANTHER PROTEIN RKD5 30 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0371 Dod-Chr2 5003943 5008466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0371 36 347 AtRKD Transcription Factor Family AT4G35590 50.305 9.32e-98 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Dod02g0371 RWP-RK 9.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0371 - - gmx:113001653 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0371 02 5003943 5008466 Dod02g0371 02 5003943 5008466 ECH