Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0367 ATGCCGAACACCAGGCCCGACGCTAAGGTTGCTGCTGACAACAGGTTGAAGCGCAAGGCTGCTGGAACTGGAACGAAGCAGACCAAGAAGAGAGCTACTAAGGATCCAAACAAGCCGAAGAGGCCTCCAACTGCTTTCTTCGTTTTCATGTCTGAGTTCAGAGTGCAGTTCAAGAAGGAGAATCCGAACAACAAATCTGTTGCTGTTGTTGGAAAAGCTGGTGGTAGCAAGTGGAAGTCGATGTCTGATGCTGAAAAAGCACCATATATCGAAAAGGCTGGGAAGAAGAAACAGCAGTATGAGAAAGAGATGAGGGCCTACAACAATATTGGAGTGGCTGAGGGAAAGAACCCTTCCGATGGAGAGTCTGACAAGTCAAAGTCCGAGGTGAATGATGATGATGATGATGAAGAGGAGGAGGAGGAAGAGGATGAGGAAGAGGATGAGGAGTAG 453 0.4812 MPNTRPDAKVAADNRLKRKAAGTGTKQTKKRATKDPNKPKRPPTAFFVFMSEFRVQFKKENPNNKSVAVVGKAGGSKWKSMSDAEKAPYIEKAGKKKQQYEKEMRAYNNIGVAEGKNPSDGESDKSKSEVNDDDDDEEEEEEEDEEEDEE* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0367 150 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 9 145 - -
Dod02g0367 150 Coils Coil 136 150 - -
Dod02g0367 150 CDD HMGB-UBF_HMG-box 39 105 - -
Dod02g0367 150 SUPERFAMILY HMG-box 24 107 IPR036910 -
Dod02g0367 150 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 39 108 IPR009071 -
Dod02g0367 150 MobiDBLite consensus disorder prediction 72 150 - -
Dod02g0367 150 MobiDBLite consensus disorder prediction 84 103 - -
Dod02g0367 150 Coils Coil 90 110 - -
Dod02g0367 150 Pfam HMG (high mobility group) box 39 108 IPR009071 -
Dod02g0367 150 Gene3D High mobility group box domain 20 110 IPR036910 -
Dod02g0367 150 MobiDBLite consensus disorder prediction 1 44 - -
Dod02g0367 150 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 9 145 IPR031061 -
Dod02g0367 150 SMART hmgende2 38 109 IPR009071 -
Dod02g0367 150 MobiDBLite consensus disorder prediction 129 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0367 Dod-Chr2 4960536 4962125 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Dod02g0367 HMG_box 8.2e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0367 K25507 K22507 gmx:100499992 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0367 02 4960536 4962125 Dod02g0367 02 4960536 4962125 ECH