Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0336 ATGCTTCGCGACCCCGCGGCCAAGTCCGCCCAAGCCCGGCTGTGCTCCGCCCGTGACCGATCTTCACCTTTCTTTCTCTTTCTCTGTCTCTTTGCTTCTCCCTCCTTTGCTGGCTATTGTTTGTTGTGGTTGATGATGATTGTTGATCTTTGTTATGAGATCTCACCGCCGCCCACCCAACTTCCCGGCCACCCCACCGTCCAGCCACAGCCACGCGGCCAAACCCGCCGCCCAAGCCCCCCCCGCATGCATCCCGGGCCGCTGCTAGGAGAAGCTTCCCCCTCCGACGCGCAAACAGCCAGCTCCGATGCGCAAACATCCAGCGAGCACGGCTGCCGCCTCCACTCGTTAGCTGCAAGCACCGGCTGTAGTCGAGCAGGCCCGCGCGCCCAGCAGGCCTGCTCGCCCAGCAGCCTGTGCACCCAGCCTCCTGCGCGCCCAGTCTCCCGCACGCGTAGCCGCCCGCACACGCAGCAGCCCGCGCGCCCAACAGCCCCCCCCCCCCCGGCGCCCAGTCCCGGCCGTCCGCCCTCCACCGCCCGCCACTGTCGCCTCCCCTGCCCCACCAAAGTCGCTGCCAAGCTCCCTTACGCCCCCGTCTCTCTGGTAACCTCATGCAAGTTATGGCGTCAAGTGGGAGAGTCTTTCAAACCTCCTAAGACATGCACCACAGTTTCATGGACTTTCCGGGGATTTTATGAGAAGGCGCTTCTTGATTATGAAAGGCATAAAATACAAGGTGGTGAGCTGAGTGTGCCTGTTGCTTCTCAACCTGAACCTATGAATATTGAAAATCAGGCTTCAGCATCAGGTAGAGCACGGAGAGATGCTGCAGCACGGGCTATGCAGGGCTGGCACTCACAGCGTCTTCTAGGAAATGGTGAAGTTAGTGACCCTATTATTAAGGATAGGAGTTCTGTGTCTATGCAAAAGCGTGAAAAGCAGCTTAAAAGCATCAATTTACTTAAACGCAAGAAACCATCATACATGGACAACACAGTCAAAGCAGCACGTAGTAAACCGTCTAAACCACAATTGGACACAGCTGTGATTGATATTGGACCTCCTGCTGATTGGGTGAAAATCAATGTGCAAAAAACTAAGGATTGTTTTGAGGTGTATGCTTTAGTTCCTGGCCTTCTGCGAGAAGAGGTGCGTGTTCAATCAGACCCAGCAGGTCGCTTGGTTATAAGCGGTGAGCCTGAGCATCCCAATAATCCTTGGGGTGTAACACCTTTCAAAAAGGTTGTCAGTTTGCCCGCAAGAATTGATCCTCATCAGACATCCGCAGTGGTGACGCTGCATGGACAGTTGTTTGTTCGTGTCCCATTTGAGCAATCAGAATAG 1347 0.5538 MLRDPAAKSAQARLCSARDRSSPFFLFLCLFASPSFAGYCLLWLMMIVDLCYEISPPPTQLPGHPTVQPQPRGQTRRPSPPRMHPGPLLGEASPSDAQTASSDAQTSSEHGCRLHSLAASTGCSRAGPRAQQACSPSSLCTQPPARPVSRTRSRPHTQQPARPTAPPPPAPSPGRPPSTARHCRLPCPTKVAAKLPYAPVSLVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKIQGGELSVPVASQPEPMNIENQASASGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDRSSVSMQKREKQLKSINLLKRKKPSYMDNTVKAARSKPSKPQLDTAVIDIGPPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPNNPWGVTPFKKVVSLPARIDPHQTSAVVTLHGQLFVRVPFEQSE* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0336 448 SUPERFAMILY HSP20-like chaperones 357 444 IPR008978 -
Dod02g0336 448 MobiDBLite consensus disorder prediction 94 111 - -
Dod02g0336 448 MobiDBLite consensus disorder prediction 160 176 - -
Dod02g0336 448 MobiDBLite consensus disorder prediction 125 159 - -
Dod02g0336 448 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 6-LIKE 203 447 - -
Dod02g0336 448 CDD ACD_sHsps_p23-like 367 443 - -
Dod02g0336 448 Gene3D - 200 251 IPR036431 GO:0003677
Dod02g0336 448 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 348 448 IPR002068 -
Dod02g0336 448 MobiDBLite consensus disorder prediction 123 183 - -
Dod02g0336 448 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 203 447 IPR045147 GO:0006357
Dod02g0336 448 Gene3D - 339 448 IPR008978 -
Dod02g0336 448 MobiDBLite consensus disorder prediction 61 111 - -
Dod02g0336 448 CDD ARID 203 241 - -
Dod02g0336 448 Pfam Hsp20/alpha crystallin family 365 447 IPR002068 -
Dod02g0336 448 SUPERFAMILY ARID-like 202 252 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0336 Dod-Chr2 4605993 4618500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0336 185 446 ARID Transcription Factor Family AT1G76510 63.296 9.63e-105 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0336 - - gmx:100791081 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0336 02 4605993 4618500 Dod05g0069 05 1033140 1041959 PCT