Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0330 ATGACTGCACCACCAACCCCCTTCTCCGCCGTCATCCTCATCCTCACCCTCTTCCTTTTCCCGGCAGCGACCTCGCAAATTCTCCAGCGCGAAACACACTTGTGGGAGGGTCCCTTCAACGCCTCCTATGTCGGCATCTTCGACGTCACAGACAACGCGACAATCAACCGAGGCGCACTCCAGATCACCCCCGACACCGCCAACGACGACTCCGGCTTCAGCTTCATCAACAACTCCGGCAGAGTCTTCTACAGTGAACCCTTCACCCTCTGGGACGGCAACGACGAAACCGGAAAACTCGTCTCCTTCAACACCTCCTTCCTCATCAACGTGAACCGCGTGGACAAAAAACCACCGGGCGAAGGCATCGCCTTCATCATTGCCCCCAACAAAACCATCCCTCTCAACAGCTACGGTGGCTTCCTCGGCCTCACTAACGCCTCCACCGATGGCAGCTCCGACAACAAGCTCGTCGCCATCGAACTTGACACCGTCAAGCAGCAGGTCTTCGACGACCCTGACAACAACCACGTCGGGCTCGACATCAACGGCGTCAGGTCCAACGTCACTGTCTCACTGTCGAAGTTCGGTTTCGAGATCTCCCCCAATGATACTGCGTTCTACGTGCTTTGGGTGGACTACAACGGCACGAGCAAGGTGATCGATGTTTACATGGCTTCACAGCCTGATAAAGATGGTCCCTTAGTGGCGAAGCCGTTGGATCCTGTGTTGAGTACGAGGCTTGATCTGAAGGAGTTCGTGAACAGAGAGTCATATTTTGGGTTCTCTGCTTCCACAGGGGTAACGGTTGAGTTGAACTGTGTTTTGAGGTGGAACATCTCCATTGAGATCTTCCCTCAAAGTGACGGGAAGGCGTTGAAGATTGCGTTGGGTGTTGGGGTTCCTGTTGTGGTTCTTGCTTTCTTGGGGACTGGTTGGTTTGTGTACCGCATGTTAAGGAAGAGAAAGGTGAGTGCTTCTAACCCGCAGATTTTGGGTGCTCTTAAGAGCTTGCCGGGTACACCGAGGGAGTTTACGTATCAGGAACTGAAGAAGGCTACTCATAATTTTGATGACAAGAACAAGCTTGGACAAGGTGGGTTTGGTGTGGTCTACAGAGGGACATTGCCAAAGGAGAATCTGGAAGTGGCTGTTAAGATGTTCTCCAGGGACAAGATGAAGAGCACCGATGATTTCTTGGCTGAGCTCACCATTATCAACCGTCTCCGTCACAAACACCTTGTCAGGTTACAAGGATGGTGCCACATGAATGGAGTATTGCTTTTAGTATACGAATACATGCCTAATGGCAGCTTGGACAACCACATATTCTTTGAGGATGGGATCAGCAAAAACCCCTTGAGTTGGCATCTCAGATACAAGATCATATCAGGGGTGGCTTCAGCATTGCATTACCTGCATAACGAGTATGATCAGAAAGTGATCCACAGAGACCTTAAGGCCAGCAACATCATGCTGGACTCCGACTTCAATGCACGTTTAGGTGACTTTGGTTTGGCCCGTGCAATTGAGAATGAGAAAACGTCGTATGCAGAGTTGGAGGGAGTGCCTGGCACCATGGGCTACATTGCACCTGAGTGCTTCCACACTGGCAAGGCCACACGGGAGTCAGATGTTTACGGGTTTGGGGCTGTGTTGCTTGAGGTGGTGTGTGGCCAGAGGCCATGGACAAAGATTGGGGGCTATCAATTCTTGGTGGATTGGGTTTGGCACCTGCATCGTGAAGGAAAGGTACTAGATGCAGTGGACCCAAGACTAGAGAATGATTACGTGGCTGAAGAGGCAGAGAGGATATTGAAATTGGGACTAGCATGCTCCCATCCCATTGCTGGTGAGAGGCCTAAGCTGCAGCTAATTGTTCAGATCATATCTGGGTCAGTGTCTGTGCCTCATGTCCCACCATTCAAACCAGCTTTTGTGTGGCCAGCCATGGACCTAGAGAGCATAAGTGCCCTTACATCAGCAACTACTACTGAGTACACACCCATTAACACACATTCGTCTATGAATGTTGAATTCTCAGATAGCAGCTCCATCTATCTATCAAACCCACCCCACCCCAACTCTGACATGACTCCACCACCAACCCCTTTCTCCGCCGCCACCACCGCCGTCATCCTCACCCTCTTCCTCTTCCCGGCGGCGACCTCGGAAATCCTCCAACCAAAACAATTATCGTGGGGTTCTTTCAACGACTCTCAACGCAAAACTGTCTTCGAATTAATCAACGCGAACATCAACTTCGGCGCCCTCCAGGTCACCCCCGAGAGTGCCGGCGACGTCAGCTTAACCAACATCTCCGGCAGAGTCTTCTATAAGGATCCCTTTATCCTCTGGGACGACGAAACCGGAAAACTCGCCTCCTTCAACACCTCCTTCCTCATCAACGTGGACCGCTACCACAACAAAACACCAGGCGAAGGCGTCGCCTTCATCATTGCACCCAACCAAACCATCCCTCCCAACAGCTACGGCGGCTTCCTCGGCCTAACCAACGCCTCCACCGACGGCAGCGCAGACAACAAGCTCGTGGCCGTCGAACTTGACACCGTCAAGCAGCAGGAATTTGACGACCCCGACGACAACCACATCGGGCTCGACATCAACGGGGTCAGGTCCAACGTCACTGTCTCACTGTCGAAGTTCGGTTTCGAGATCTCCCCCAATGATACTAAGTTCTACGTGCTTTGGATAGACTACAACGGCACGAGCAAGGTGATCGATGTGTACATGGCTTCACAGGTTCATAGATATGGCCCCTTAGTGGCGAAGCCGTCGAGTCGTGTGTTCAGTTCGGGGCTTGATCTGAAAGAGCTCGTGAATCGAGAGTCTTATTTTGGGTTCTCTGCTTCCACTGGGGTAACGGTTGAGTTGAACTGTGTTTTGAGGTGGAACATCTCCATTGAGGTCTTCCCTGGGAAAAGCAATGGGAAGGCGTTGAAGATTGCGCTGGGTGTTGGGGTTCCTGTTGTGGTTCTTTCTTTGTTGGGGGCTGGTTGGTTGGTGTACCGCATGTTCAGAAAGAGAAAGGAGAGTGCCTCTAACCCGCAGATTTTGGGTGCTCTTAAGAGCTTGCCGGGGACACCGAGGGAGTTTACGTACCGGGAACTGAAGAAGGCTACTCATAATTTTGATGACAAGAACAAGCTTGGACAAGGTGGGTTTGGTGTGGTCTACAGAGGGACACTGCCTAAAGAGAATCTGGAAGTGGCTGTCAAGATGTTCTCCAGGGACAAGATGAAGAGCACCGATGATTTCTTGGCTGAGCTCACCATTATCAACCGTCTCCGTCACAAACACCTTGTCAAGTTACAAGGATGGTGCCACATGAATGGAGTATTGCTTTTAGTATACGAATACATGCCTAATGGCAGCTTGGACAACCACATATTCTTTGAGGATGGGATCAGCAAAAACCCCTTGAGTTGGCATCTCAGATACAAGATCATATCAGGGGTGGCTTCAGCATTGCATTACCTGCATAACGAGTATGATCAGAAAGTGATCCACAGAGACCTCAAGGCCAGCAACATCATGCTGGACTCCGACTTCAATGCACGTTTAGGTGACTTTGGTTTGGCCCGTGCAATTGAGAATGAGAAAACGTCGTATGCAGAGTTGGAGGGAGTGCCTGGCACCATGGGCTACATTGCACCTGAGTGCTTACACACTGGCAAGGCCACACGGGAGTCAGATGTTTACGGGTTTGGGGCTGTGTTGCTTGAGGTGGTGTGTGGCCAGAGGCCATGGACAAAGATTGGGGGCTATCAATTCTTGGTGGATTGGGTTTGGCACTTGCATCGTGAAGGAAAGGTACTAGATGCAGTGGACCCAAGACTAGAGAATGATTATGTGGCTGAAGAGGCTGAGAGGATATTGAAATTGGGACTAGCATGCTCTCATCCCATCGCTGGTGAGAGGCCTAAGATGCAACTAATTGTTCAGATCATATCTGGGTCAGTGTCTGTGCCTCATGTCCCACCATTCAAACCAGCTTTTGTGTGGCCAGCCATGGACCTAGAGAGCATAAGTGCCCTTACATCGGCAACTACTACTGAGTACACACCCATTAACACACATTCTTCTATGAATGTTGAATTCTCAGATAGCAGCTCCATCGTTTAA 4146 0.5082 MTAPPTPFSAVILILTLFLFPAATSQILQRETHLWEGPFNASYVGIFDVTDNATINRGALQITPDTANDDSGFSFINNSGRVFYSEPFTLWDGNDETGKLVSFNTSFLINVNRVDKKPPGEGIAFIIAPNKTIPLNSYGGFLGLTNASTDGSSDNKLVAIELDTVKQQVFDDPDNNHVGLDINGVRSNVTVSLSKFGFEISPNDTAFYVLWVDYNGTSKVIDVYMASQPDKDGPLVAKPLDPVLSTRLDLKEFVNRESYFGFSASTGVTVELNCVLRWNISIEIFPQSDGKALKIALGVGVPVVVLAFLGTGWFVYRMLRKRKVSASNPQILGALKSLPGTPREFTYQELKKATHNFDDKNKLGQGGFGVVYRGTLPKENLEVAVKMFSRDKMKSTDDFLAELTIINRLRHKHLVRLQGWCHMNGVLLLVYEYMPNGSLDNHIFFEDGISKNPLSWHLRYKIISGVASALHYLHNEYDQKVIHRDLKASNIMLDSDFNARLGDFGLARAIENEKTSYAELEGVPGTMGYIAPECFHTGKATRESDVYGFGAVLLEVVCGQRPWTKIGGYQFLVDWVWHLHREGKVLDAVDPRLENDYVAEEAERILKLGLACSHPIAGERPKLQLIVQIISGSVSVPHVPPFKPAFVWPAMDLESISALTSATTTEYTPINTHSSMNVEFSDSSSIYLSNPPHPNSDMTPPPTPFSAATTAVILTLFLFPAATSEILQPKQLSWGSFNDSQRKTVFELINANINFGALQVTPESAGDVSLTNISGRVFYKDPFILWDDETGKLASFNTSFLINVDRYHNKTPGEGVAFIIAPNQTIPPNSYGGFLGLTNASTDGSADNKLVAVELDTVKQQEFDDPDDNHIGLDINGVRSNVTVSLSKFGFEISPNDTKFYVLWIDYNGTSKVIDVYMASQVHRYGPLVAKPSSRVFSSGLDLKELVNRESYFGFSASTGVTVELNCVLRWNISIEVFPGKSNGKALKIALGVGVPVVVLSLLGAGWLVYRMFRKRKESASNPQILGALKSLPGTPREFTYRELKKATHNFDDKNKLGQGGFGVVYRGTLPKENLEVAVKMFSRDKMKSTDDFLAELTIINRLRHKHLVKLQGWCHMNGVLLLVYEYMPNGSLDNHIFFEDGISKNPLSWHLRYKIISGVASALHYLHNEYDQKVIHRDLKASNIMLDSDFNARLGDFGLARAIENEKTSYAELEGVPGTMGYIAPECLHTGKATRESDVYGFGAVLLEVVCGQRPWTKIGGYQFLVDWVWHLHREGKVLDAVDPRLENDYVAEEAERILKLGLACSHPIAGERPKMQLIVQIISGSVSVPHVPPFKPAFVWPAMDLESISALTSATTTEYTPINTHSSMNVEFSDSSSIV* 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0330 1381 SMART serkin_6 357 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0330 1381 SMART serkin_6 1051 1311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0330 1381 SUPERFAMILY Protein kinase-like (PK-like) 339 657 IPR011009 -
Dod02g0330 1381 Gene3D - 39 294 - -
Dod02g0330 1381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Dod02g0330 1381 ProSiteProfiles Protein kinase domain profile. 357 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0330 1381 ProSitePatterns Protein kinases ATP-binding region signature. 1057 1080 IPR017441 GO:0005524
Dod02g0330 1381 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 17 679 - -
Dod02g0330 1381 ProSitePatterns Protein kinases ATP-binding region signature. 363 386 IPR017441 GO:0005524
Dod02g0330 1381 ProSiteProfiles Protein kinase domain profile. 1051 1333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0330 1381 Gene3D Transferase(Phosphotransferase) domain 1 434 636 - -
Dod02g0330 1381 Gene3D Transferase(Phosphotransferase) domain 1 1128 1330 - -
Dod02g0330 1381 CDD lectin_legume_LecRK_Arcelin_ConA 736 972 IPR001220 GO:0030246
Dod02g0330 1381 SUPERFAMILY Protein kinase-like (PK-like) 1033 1351 IPR011009 -
Dod02g0330 1381 Pfam Legume lectin domain 49 283 IPR001220 GO:0030246
Dod02g0330 1381 Pfam Legume lectin domain 733 976 IPR001220 GO:0030246
Dod02g0330 1381 CDD STKc_IRAK 363 630 - -
Dod02g0330 1381 CDD lectin_legume_LecRK_Arcelin_ConA 52 279 IPR001220 GO:0030246
Dod02g0330 1381 Gene3D - 734 987 - -
Dod02g0330 1381 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 738 1373 - -
Dod02g0330 1381 Pfam Protein kinase domain 358 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0330 1381 Pfam Protein kinase domain 1052 1282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0330 1381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1175 1187 IPR008271 GO:0004672|GO:0006468
Dod02g0330 1381 Gene3D Phosphorylase Kinase; domain 1 342 433 - -
Dod02g0330 1381 Gene3D Phosphorylase Kinase; domain 1 1036 1127 - -
Dod02g0330 1381 SUPERFAMILY Concanavalin A-like lectins/glucanases 47 288 IPR013320 -
Dod02g0330 1381 CDD STKc_IRAK 1057 1324 - -
Dod02g0330 1381 SUPERFAMILY Concanavalin A-like lectins/glucanases 742 977 IPR013320 -
Dod02g0330 1381 PANTHER - 17 679 - -
Dod02g0330 1381 PANTHER - 738 1373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0330 Dod-Chr2 4499301 4527692 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0330 78 646 Receptor kinase-like Gene Family AT5G55830 37.789 8.72e-120 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dod02g0330 Pkinase 7.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0330 - - gmx:100780014 961.829