Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0315 ATGCCACAAAACTGCATAGCACCAAAACCAGAATACAGCAGTAGTAGTCACTGTACGGAAGGGCCACCACCAGAGATGACTGATCAGCCCCATAACACAAGTGACAACCTTTCCTACCCCATAAGAACCAATGAACAACAATCCATACCAAAACTCACCATGTACCCCATAACTCTGAAGTTTGAGGAGTTGGTGTATAAAGTAAAACTAGAGCAGAAAGGACTGTGTTGGGGCAGCAAATGGACCTGCAAAGAGAAGACCATATTGAATGGGATCACAGGTGTGGTGTGCCCAGGTGAGATACTGGCCATGCTGGGCCCATCAGGTAGTGGAAAGACCACACTCCTCACAGCTCTTGGAGGCCGCCTCAGTGGTAAACTATCTGGAAAGATCACATACAACAACCAGCCTTTCTCAGGAGCCATAAAAAGAAGGACAGGTTTTGTGGCTCAGGATGATGTGCTATACCCTCACCTCACTGTTACTGAGACACTAGTGTTCACTGCACTGCTGAGGCTCCCAAACAGCTTAACAAGGGATGAGAAAGTGCAGCATGTGGAGAGGGTCATCACTGAGCTAGGACTGAGCAGGTGCAGGAGCAGCATGATAGGAGGGCCACTTTTCAGAGGGATATCTGGTGGGGAGAAAAAGAGGGTGAGCATAGGCCAGGAAATGCTCATCAACCCAAGTCTACTGTTGCTTGATGAGCCCACATCAGGATTGGATTCAACCACAGCACAAAGGATCATCAGCACCATCAAGCGCCTTGCTAGTGGAGGAAGAACTGTTGTCACCACAATTCACCAACCCTCTAGCCGCCTCTACTACATGTTTGACAAGGTGGTCTTGCTCTCTGAAGGGTCCCCCATCTACTATGGTCCTGCTTCCACCGCCTTGGACTACTTTTCTTCAGTTGGTTTCTCCACATGTGTGACTGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAATGGGATTGCCCCGGATCATTCCAAGCATGCAACTGAACAAAGTGAGGGCCTAGAACAAGAGAGGAAGCAGGTGAGAGAAGCTCTCATATCTGCTTATGACAAGAACATAGCCACAAGGCTGAAAGCTGAGCTTTGCAGCTTGGAAGTGAACAACTACAATACCACTAAAGATGCTTGTGCAAGGAATCAGATGAAACCGGAGCAATGGTGCACAAGTTGGTGGCATCAGTTCAAAGTACTATTGCAAAGGGGAGTGAGGGAGAGAAGGTTCGAAGCCTTCAATAGGCTGAGAATATTCCAGGTCATAAGTGTCGCTTTTCTTGGTGGACTCTTGTGGTGGCATACACCAGAATCACACATTGAAGACCGGGTAGCCTTGCTCTTTTTCTTCTCAGTTTTTTGGGGATTCTACCCCCTCTACAATGCAGTTTTCACATTCCCTCAAGAGAGGAGAATGCTGATAAAGGAAAGATCATCAGGAATGTACCGCCTTTCTTCCTACTTTCTAGCTAGAACAATAGGAGACTTGCCACTGGAGCTTGCACTTCCAACTGCATTTGTCTTCATAATCTATTGGATGGGAGGGCTTAAACCTGATCCTGTGACTTTCATCCTTTCCCTTCTTGTGGTTCTTTACAGTGTCCTTGTCTCTCAAAGTCTAGGCTTAGCATTCGGTGCTATCTTGATGGAGATCAAACAAGCCACTACGCTTGCTTCTGTGACAACCCTTGTGTTTCTCATTGCTGGAGGATACTATGTTCAACAGATTCCTCCCTTTATAGTGTGGCTCAAGTACTTAAGCTATAGCTACTATTGTTACAAGCTGCTTCTTGGTGTCCAATACAGCGAAGATGATCACTATGAGTGCTCACAGGGGGTGTTGTGTAGGGTTGCAGATTTTCCTCCAATCAAGTCAATGGGTTTGAAACATATGTGGGTTGATGTGTGCATTATGGCACTGATGTTGGTGGGGTATCGACTAATTGCATACTTAGCACTGCATAGAGTGAGGTAG 1986 0.4673 MPQNCIAPKPEYSSSSHCTEGPPPEMTDQPHNTSDNLSYPIRTNEQQSIPKLTMYPITLKFEELVYKVKLEQKGLCWGSKWTCKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLSGKLSGKITYNNQPFSGAIKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPNSLTRDEKVQHVERVITELGLSRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRIISTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGSPIYYGPASTALDYFSSVGFSTCVTVNPADLLLDLANGIAPDHSKHATEQSEGLEQERKQVREALISAYDKNIATRLKAELCSLEVNNYNTTKDACARNQMKPEQWCTSWWHQFKVLLQRGVRERRFEAFNRLRIFQVISVAFLGGLLWWHTPESHIEDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVLVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYVQQIPPFIVWLKYLSYSYYCYKLLLGVQYSEDDHYECSQGVLCRVADFPPIKSMGLKHMWVDVCIMALMLVGYRLIAYLALHRVR* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0315 661 CDD ABCG_EPDR 56 293 - -
Dod02g0315 661 Pfam ABC-2 type transporter 400 605 IPR013525 GO:0016020|GO:0140359
Dod02g0315 661 Coils Coil 331 351 - -
Dod02g0315 661 Gene3D - 78 305 IPR027417 -
Dod02g0315 661 MobiDBLite consensus disorder prediction 1 38 - -
Dod02g0315 661 ProSitePatterns ABC transporters family signature. 211 225 IPR017871 GO:0005524
Dod02g0315 661 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 303 IPR027417 -
Dod02g0315 661 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 41 659 - -
Dod02g0315 661 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 311 IPR003439 GO:0005524
Dod02g0315 661 SMART AAA_5 98 288 IPR003593 -
Dod02g0315 661 MobiDBLite consensus disorder prediction 8 38 - -
Dod02g0315 661 Pfam ABC transporter 90 239 IPR003439 GO:0005524
Dod02g0315 661 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 41 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0315 Dod-Chr2 4290231 4293437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0315 88 288 Calmodulin-binding Proteins AT2G36910 30.189 7.18e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0315 K05681 - gmx:100794774 1191.79