Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0284 ATGAAGAGCATCAACGACGATGGTTCCTCGCAACAACAAGATCTTGACCCTCAAAGCGACCACAGCTCCGATTACCTCGCCCATTCCCACCCCAACCCTCAGCCCCGCCGCCCCCGCGGTTTCGCCGCCGCGGCTTCGGCGGCTGCGAATTCCGCTGGGAAGGGGAAGAAGGAGAGGGAGAAGGAGAAGGAGCGCACCAAACTCCGCGAGCGTCACCGCCGCGCCATCACCAGCCGCATGCTCGCCGGCCTCCGCCAGTACGGAAACTTCCCCCTGCCGGCTCGTGCCGACATGAACGACGTACTCGCCGCCCTCGCGCGTGAGGCTGGTTGGGTCGTCGAGGCTGACGGCACCACCTACCGCCAGTGCCCTCCTCCTTCTCACAGGGGATCATTTGCAGCTAGGTCAGTTGAAAGTCAACTCTCTGCTGGCTCTTTGAGACCTTGTTCTGTTAAGGAAACACTGGAGAATCAGCCATCAGTCCTTAGAATCGATGAATGCTTGTCGCCTGCGTCCATTGACTCTGTTGTAATTGCAGAAAGGGACTCGAAGAATGAGAAATATGCAAGTGCAAGCCCTGTCAATCCGGTTGACTGCTTGGAGGCCGATCAGCTTATGCATGATATTCATTCTGGGGTGCATGAGAATGACTTCACTGGCACACCATATGTTCCTGTTTACTTGAAGCTTCCAGCGGGTATAATTAATAAATTTTGCCAGTTGATTGATCCTGAAGGAATTAGGCAGGAGCTAATCCATATTAAGTCTTTGAATATAGATGGTGTCATTGTGGATTGTTGGTGGGGTATTGTTGAAGGCTGGAGCCCCCAGAAATATCTGTGGTCTGGCTATAGGGAGCTTTTTAACATTATTAGAGAATTCAAGTTGAAGCTACAGGTTGTCATGGCATTTCATGAATGTGGGGGGAATGATTCTAGTGATGCATTGATTGCCCTCCCACAATGGGTTTTGGATATTGGAAAAGACAATCAGGATATATTCTTCACAGATCGTGAAGGACGGAGGAATACTGAATGCCTTTCTTGGGGAATCGATAAAGAGCGAGTTCTGAAAGGAAGAACTGGAATTGAGGTCTATTTTGATATGTTGAGAAGCTTTCGGACAGAGTTTGATGACCTGTTTGCTGAAGGTCTGATTTCTGCTGTAGAAATTGGACTTGGAGCATCTGGGGAGCTGAAATACCCTTCTATTTCAGAAAGGATGGGATGGAGGTATCCTGGTATTGGCGAGTTTCAGTGCTATGATAAATATCTGCAACATAGTCTACGCAGAGCAGCCAAATTACGGGGCCACTCTTTCTGGGCTAGAGGACCTGATAATGCTGGACACTACAACTCTATGCCGCATGAAACTGGATTCTTCTGTGAGCGAGGTGATTATGACAACTATTATGGACGCTTCTTCTTACATTGGTACTCCCAGACATTAATAGACCATGCAGATAATGTTCTGTCCCTTGCAAACCTTGCTTTTGAGGAAACAAAAATAATTGTCAAGGTAGTGTTTCTGGTATTGCAGTTTTTTCTTTGCATGCTAGTGTTGATTACATTCACAATTGATTGA 1584 0.4804 MKSINDDGSSQQQDLDPQSDHSSDYLAHSHPNPQPRRPRGFAAAASAAANSAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVEADGTTYRQCPPPSHRGSFAARSVESQLSAGSLRPCSVKETLENQPSVLRIDECLSPASIDSVVIAERDSKNEKYASASPVNPVDCLEADQLMHDIHSGVHENDFTGTPYVPVYLKLPAGIINKFCQLIDPEGIRQELIHIKSLNIDGVIVDCWWGIVEGWSPQKYLWSGYRELFNIIREFKLKLQVVMAFHECGGNDSSDALIALPQWVLDIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMLRSFRTEFDDLFAEGLISAVEIGLGASGELKYPSISERMGWRYPGIGEFQCYDKYLQHSLRRAAKLRGHSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLIDHADNVLSLANLAFEETKIIVKVVFLVLQFFLCMLVLITFTID* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0284 527 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 394 416 IPR001554 GO:0000272|GO:0016161
Dod02g0284 527 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 258 272 IPR001554 GO:0000272|GO:0016161
Dod02g0284 527 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 279 297 IPR001554 GO:0000272|GO:0016161
Dod02g0284 527 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 301 322 IPR001554 GO:0000272|GO:0016161
Dod02g0284 527 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 467 486 IPR001554 GO:0000272|GO:0016161
Dod02g0284 527 SUPERFAMILY (Trans)glycosidases 218 503 IPR017853 -
Dod02g0284 527 Pfam BES1/BZR1 plant transcription factor, N-terminal 53 199 IPR008540 -
Dod02g0284 527 Gene3D Glycosidases 214 513 - -
Dod02g0284 527 PANTHER BETA-AMYLASE 8 58 507 - -
Dod02g0284 527 MobiDBLite consensus disorder prediction 1 70 - -
Dod02g0284 527 MobiDBLite consensus disorder prediction 53 70 - -
Dod02g0284 527 PANTHER - 58 507 IPR001554 GO:0000272|GO:0016161
Dod02g0284 527 MobiDBLite consensus disorder prediction 1 29 - -
Dod02g0284 527 Pfam Glycosyl hydrolase family 14 243 505 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0284 Dod-Chr2 3802188 3808430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0284 10 507 Glycoside Hydrolase AT5G45300 66.350 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Dod02g0284 Glyco_hydro_14 4.9e-63 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0284 K01177 - gmx:100777004 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0284 02 3802188 3808430 Dod02g0284 02 3802188 3808430 ECH