Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0283 ATGGGGTCTGGTGGCAGCAAAGCCACTTCTTCTTGCAGTTCATCTTCTTCTTTCAGGAAGGATCGATCTAAGGGGCACAGAGGTTTTCCATCTTACTGTTTGGGAACAACATCTGGATCTCATGACAGTGATCATGATGACCAGGTTTGTGAACAGAAAAAAGTAAATGGAAGTGATGTTACATACACCAGTGGCAATGAAATAGACTCAGATGAATTGAAAACAGAGTCCTTTAGAAAGGTCCAATATGATAATGAAATTCCTTCTAACATCGACCTTGATGAGTGGGGGCAAACTGCATCAAGAACCGGTAGCAGCTCTTCTCATGCTTCTTCAACTCAGTCCTTGAACCCTTCAAGTCGATTCCTTTCTCGCTTTAGCCTCATTCCCGGTAACGTTAGCTTCAGACTTAGCAGAACCACTAGTTTGGGTTCATCGAGGCCTCGCCCTGTTTCTTCTGCAAGTCTCTCAATGTTTAACGGTGAAGATGAGCATAATCTGCATCCAGGCCCCCCAACTCAACAACATAGTGACTTGCTTAATGCATCTTTTGGTAATCGAGTGCCTATACAGTATCACGAAGGTGCTTCTAATGATTTAAGATCCAATGCCCCAGCATTGAGTTCCTTTGGCGACTTGCAGAGCAGTTCCACAATTTCTCCTATCCAGCATGTGGTTAGAGATGGAGATGGTACAAGAGAAGTGGTGGATATGAACCTGTTTTCTCAAAGAATTCATACTGACGCAGAAAATGTCGAGACTAGACATGTTGATAGACGTAATGGAGCACGAGAACCTGTTGAACGAAATGTTCGTTTTAGCCGAACTTTAAGTGTTGGAAGACTTCGTGATAGAGTTCTTCGCCGATCAACATTATCTGAGTTCACCTTTGGCACTCTTCAACAGGAGAGAGAAGAGAGAGATGCTATTCGCGATAGGGGAAGAGAAGTACCGGAGAGACTTACAAGAGTGTCACCGCCTAGTCGAAATGCTGTGAATTCTCCATCTACAATGTCTAGCTCCTTGTTTAGCATCCAAGACTATGAGGTTGAAACTTCACGATCAAGAGAAACTAGGTATCAGGATCTGCTGGAACACAGGTCTAATTTCCTTGAACGGCGAAGAAGAATACGGTCCCAGGTTCGTGCTCTTCAGCGATTGGGAAGCCGGTTTGAAAATCTTTCTGGACATGATAGATCATGTGTCTTGTCTGGTCAACATAGGAATGGTCGTTGTACATGCCGAATCAATAGTCGTGATACCAATTCAAATGACGATACAAATGCCAGAGCTAGCATATCAAGAATTGTTATGCTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTGGTTTTGTCTTCCCGCCCTTCCGTGTCTTCTATTGGATCTGTTCCTGCACCTAATGAAGTGGTGGAATCCTTGCCTGTCAAATTATACACAAAGTTACACAAACATCAAGAAGATCCTGTACAATGCTATATATGCCTAGTGGAGTATGAGGATGGAGACAGTATGCGAGTCCTTCCTTGCCGCCATGAATTTCATAGAACATGTATAGACAAGTGGCTGAAGGAGATTCACAGGGTATGCCCACTATGTAGAGGGGACATTTGTGTATCAGATTCACTGCCAATGGAGAACTAA 1659 0.4358 MGSGGSKATSSCSSSSSFRKDRSKGHRGFPSYCLGTTSGSHDSDHDDQVCEQKKVNGSDVTYTSGNEIDSDELKTESFRKVQYDNEIPSNIDLDEWGQTASRTGSSSSHASSTQSLNPSSRFLSRFSLIPGNVSFRLSRTTSLGSSRPRPVSSASLSMFNGEDEHNLHPGPPTQQHSDLLNASFGNRVPIQYHEGASNDLRSNAPALSSFGDLQSSSTISPIQHVVRDGDGTREVVDMNLFSQRIHTDAENVETRHVDRRNGAREPVERNVRFSRTLSVGRLRDRVLRRSTLSEFTFGTLQQEREERDAIRDRGREVPERLTRVSPPSRNAVNSPSTMSSSLFSIQDYEVETSRSRETRYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCVLSGQHRNGRCTCRINSRDTNSNDDTNARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPNEVVESLPVKLYTKLHKHQEDPVQCYICLVEYEDGDSMRVLPCRHEFHRTCIDKWLKEIHRVCPLCRGDICVSDSLPMEN* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0283 552 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 552 - -
Dod02g0283 552 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 552 - -
Dod02g0283 552 MobiDBLite consensus disorder prediction 92 118 - -
Dod02g0283 552 MobiDBLite consensus disorder prediction 139 179 - -
Dod02g0283 552 SMART ring_2 497 538 IPR001841 -
Dod02g0283 552 SUPERFAMILY RING/U-box 475 545 - -
Dod02g0283 552 Pfam Ring finger domain 496 539 IPR001841 -
Dod02g0283 552 MobiDBLite consensus disorder prediction 139 160 - -
Dod02g0283 552 MobiDBLite consensus disorder prediction 1 18 - -
Dod02g0283 552 MobiDBLite consensus disorder prediction 90 118 - -
Dod02g0283 552 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 460 544 IPR013083 -
Dod02g0283 552 ProSiteProfiles Zinc finger RING-type profile. 497 539 IPR001841 -
Dod02g0283 552 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0283 Dod-Chr2 3795278 3799866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0283 210 546 C3H Transcription Factor Family AT5G45290 61.919 6.20e-120 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0283 - - gmx:100815830 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0283 02 3795278 3799866 Dod02g0283 02 3795278 3799866 ECH