Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0272 ATGAAGCAGCCATCAAATTCAAAGCCATCATGGAGGCCATTCACAGCAAATTGTTGCTCAACCGAGGACCAAATCATCCTCAAGAACTTCAGCAGGCGCAAGCCATCTCGTTCGGATTTGTCCAAGGATGTTGCTCTCTTACCATCTTTTAAGAGGCTTTCTTCCTCTGGTCTGAGCCGCTCATCATCCACGAGGATCAATGAGGATCTTGCACTGTCTTTTGGTCCTGACTTGCATGACTTTCAGCTGAGTGAGATGCGTGCGATTACTCAGAATTTCTCGAGCAATTTCTTGCTTGGTGAAGGTGGGTTTGGGACAGTGCATAAAGGGTATGTGGATGATAACTTGAGGCAGGGTTTGAAGGCTCAGCCTGTTGCTGTAAAGCTTCTCGATATTGAAGGATTACAACGACACCGTGAATGGCTTGCAGAAGTTATATTTCTTGGACAGCTAAGGCACCCTAATTTGGTTAAGTTGATTGGGTATTGTTGTGAGGATAAAGGACGATTACTTGTTTATGAATTCATGCCACGAGGAAGCTTGGACAATCACTTGTTCGGAAGGTTAACATCACTACCATGGGGAACAAGATTAAAAATTGCAATAGGTGCTGCTAAAGGACTTTCCTTCTTGCATGAAGCTGAGAAACCAATCATTTATGGGGACTTCAAGACTTCTAATGTCTTGCTTGATTATGATTTCACAGCAAAATTGTCAGATTTTAAGCTAGCAGAAATGGGACCAGAGGGATCAAAAACACACGTTTCCACCAGAGTTAAGGGCATGTATGGATATGCAGCCCCAGAATACCTTTCCACAGGGCGCTTAACCACAAAGAGTGATGTCTACAGCTTCGGAGTAGTCCTACTGGAACTGCTTACAGGAAGGAGCAGCAATGGACAAGACAAGGCCAAAGACTGA 921 0.443 MKQPSNSKPSWRPFTANCCSTEDQIILKNFSRRKPSRSDLSKDVALLPSFKRLSSSGLSRSSSTRINEDLALSFGPDLHDFQLSEMRAITQNFSSNFLLGEGGFGTVHKGYVDDNLRQGLKAQPVAVKLLDIEGLQRHREWLAEVIFLGQLRHPNLVKLIGYCCEDKGRLLVYEFMPRGSLDNHLFGRLTSLPWGTRLKIAIGAAKGLSFLHEAEKPIIYGDFKTSNVLLDYDFTAKLSDFKLAEMGPEGSKTHVSTRVKGMYGYAAPEYLSTGRLTTKSDVYSFGVVLLELLTGRSSNGQDKAKD* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0272 306 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
Dod02g0272 306 PANTHER OS01G0588500 PROTEIN-RELATED 34 305 - -
Dod02g0272 306 Gene3D Transferase(Phosphotransferase) domain 1 176 306 - -
Dod02g0272 306 SUPERFAMILY Protein kinase-like (PK-like) 79 297 IPR011009 -
Dod02g0272 306 Pfam Protein tyrosine and serine/threonine kinase 98 296 IPR001245 GO:0004672|GO:0006468
Dod02g0272 306 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL15-RELATED 34 305 - -
Dod02g0272 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Dod02g0272 306 Gene3D Phosphorylase Kinase; domain 1 74 175 - -
Dod02g0272 306 ProSiteProfiles Protein kinase domain profile. 93 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0272 Dod-Chr2 3596174 3598645 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0272 67 306 Glycoside Hydrolase AT3G07070 52.245 1.44e-75 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod02g0272 PK_Tyr_Ser-Thr 2.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0272 - - gmx:100820300 514.612