Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0270 ATGAAGCAGCCATCAAATTCAAAGCCATCATGGAGGCCATTCACAGCAAATTGTTGCTCAACTGAGGACCAAACAATCTTCAAAAACTTCAGCAGGTGCAGGCCATCTCGTTCGGATTTGTCCAAGGATGTTGGACCCTTACCATCTTTCAGGAGGCTTTCTTTCTCTGATCTCAGCCGTTCATCATCCATAAGGATCAATGAGGATCTTGCACTGTCATTTGGTCCTGATTTGCATGACTTTCAGCTGAGTGAGCTTCGTGCCATTACACAGAATTTCTCGAGCAATTTCTTGCTCGGAGAAGGTGGGTTTGGGACAGTGCATAAAGGGTATGTGGATGATAACTTGAGGCAGGGTTTGAAGGCTCAGCCTGTTGCTGTCAAGCTTCTCGATATTGAAGGATTACAGGGACACCGTGAATGGCTTGCAGAAGTGATATTTCTCGGGCAACTAAGGCATCCCAATTTAGTAAAGTTGATCGGGTACTGTTGTGAGGATGAAGAACGACTACTTGTCTACGAATTCATGCCACGAGGAAGCTTGGAAAATCACTTGTTCAGAAGGCTAACATCACTACCGTGGGGTACAAGATTAAAAATCGCAATAGGTGCTGCTAAAGGACTTTCCTTCTTGCATGGAGCTGAAAAACCAGTCATTTACCGGGACTTCAAGACTTCCAACGTCTTGCTTGATTCAGATTTCACGGCAAAATTATCAGATTTTGGACTAGCAAAAATGGGACCAGAGGGATCAAACACGCATGTCTCCACCAGAGTTATGGGCACCTATGGATATGCAGCCCCAGAATACATTTCAACAGGGCACTTGACCACAAAGAGTGATGTCTACAGCTTCGGAGTAGTCCTACTAGAACTGCTTACAGGAAGGAGAGCAATGGACAAGACAAGGCCAAAGACAGAGCAAAACCTTGTGGATTGGTCAAAGCCTTACTTGCGTAGCAGTAGGAGGTTGCGGTACATTATGGATCCAAGGCTTGCAGGCCAATATTCTGTGAAGGGTGCAAAGGAGATGGCTGTTTTGGCATTGCAATGCGTGAGTTTGAATCCTAAAGACAGGCCAAGAATGCCAACAGTTGTTGATACTCTTGAAAGCCTCCAACAGTTCAAGGACATGGCAGTTACTAGTGGACACTGGCCAGCATCATCACCTAGATCTACTACTAGAAATGGAGCTTCCAATAAGGTGAAGACAAAGCCTAGTGCAAACCAAAAGAAGCCATCTCCTCCAGTTCCGAGCAAAAAAACTTGA 1269 0.4531 MKQPSNSKPSWRPFTANCCSTEDQTIFKNFSRCRPSRSDLSKDVGPLPSFRRLSFSDLSRSSSIRINEDLALSFGPDLHDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYVDDNLRQGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRLTSLPWGTRLKIAIGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSNTHVSTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRAMDKTRPKTEQNLVDWSKPYLRSSRRLRYIMDPRLAGQYSVKGAKEMAVLALQCVSLNPKDRPRMPTVVDTLESLQQFKDMAVTSGHWPASSPRSTTRNGASNKVKTKPSANQKKPSPPVPSKKT* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0270 422 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
Dod02g0270 422 MobiDBLite consensus disorder prediction 385 416 - -
Dod02g0270 422 ProSiteProfiles Protein kinase domain profile. 93 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g0270 422 PANTHER OS01G0588500 PROTEIN-RELATED 31 397 - -
Dod02g0270 422 SUPERFAMILY Protein kinase-like (PK-like) 79 396 IPR011009 -
Dod02g0270 422 Gene3D Transferase(Phosphotransferase) domain 1 176 384 - -
Dod02g0270 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Dod02g0270 422 PANTHER SERINE/THREONINE-PROTEIN KINASE, ACTIVE SITE PROTEIN-RELATED 31 397 - -
Dod02g0270 422 Pfam Protein tyrosine and serine/threonine kinase 99 369 IPR001245 GO:0004672|GO:0006468
Dod02g0270 422 Gene3D Phosphorylase Kinase; domain 1 57 175 - -
Dod02g0270 422 MobiDBLite consensus disorder prediction 381 422 - -
Dod02g0270 422 CDD STKc_IRAK 99 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0270 Dod-Chr2 3587464 3592456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0270 67 385 Glycoside Hydrolase AT3G07070 50.155 7.61e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod02g0270 PK_Tyr_Ser-Thr 7.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0270 - - gmx:100820300 721.465