Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0256 ATGTTCGGTGGGGGAGGTGACGACGCCCTAGCGGCTCGCCTCGGCATGGTGGCGCCGCAGCCGCAGATGCTGAATCCGGCGACGTCCTCGGTGATCTCCAGCGAGATATCGCCAACGGCGGCGGAGAGGGTCCCGGCGCAGCCGCAGTGGAGCCAGCAGGAGACGAGGGAGTTCATAGCGATACGGGCGGAGCTGGAGAGGGACTTCACTGCGTCGAAGCGGAACAAGACCCTTTGGGAGGCGGTGAGCTCCAAGATGAGGGAGAGAGGGTTCAGGAGGAGCCCCGAACAGTGCAAATGCAAGTGGAAGAACCTCGTTAATCGCTATAAGGGAAAAGAGACATCTGACCCCGAGCACAGCAGGCAATGCCCATTTTTTGAAGAACTGCAGGAAGTCTTTACCCAAAGAGCGCGTAACATGCAGCGGATGCTTCTTGAATCTGAGGCTCGATCAGCTCAGACGAAGAAAGGGGTTAAAAGATCAAGTGGAGATCGGTCCTCAGAGGAATTCTCAGAAGATGATGATGAGGTTGAAGATGGCAGTGAAGAGGAGAGACCTTCTAGAAGCAATGGCCGTAAAAGGAAAGTTGACAAAATAGAAAAGTCTTCAAGGGCAAACAATCCCTCAAATAGTGTCGGTAATGCGACTAGTAGTATCCAGGAAATGCTCAAGGAATTTCTCCAGCACCAGCTAAGGATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGTGCCCAAGAAAGACAGCTGTTTGAGCAGGAATGGCGGCAAACAATGGAGAAACTTGAGAGGGAGAGATTAATGATTGAACAGGCTTGGAGGGAGAGGGAAGAAGAGAGGAGGATGAGAGAAGAGAGCCGGGCAGAGAGGAGGGAGGCTTTGTTGACAACCCTTTTGAACAAACTCATTCAGGAACCTAACTAA 924 0.5271 MFGGGGDDALAARLGMVAPQPQMLNPATSSVISSEISPTAAERVPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEAVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHSRQCPFFEELQEVFTQRARNMQRMLLESEARSAQTKKGVKRSSGDRSSEEFSEDDDEVEDGSEEERPSRSNGRKRKVDKIEKSSRANNPSNSVGNATSSIQEMLKEFLQHQLRMEMQWREMMERRAQERQLFEQEWRQTMEKLERERLMIEQAWREREEERRMREESRAERREALLTTLLNKLIQEPN* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0256 307 MobiDBLite consensus disorder prediction 147 215 - -
Dod02g0256 307 CDD GT1 48 113 - -
Dod02g0256 307 MobiDBLite consensus disorder prediction 152 167 - -
Dod02g0256 307 MobiDBLite consensus disorder prediction 182 202 - -
Dod02g0256 307 Pfam Myb/SANT-like DNA-binding domain 48 131 IPR044822 -
Dod02g0256 307 PANTHER - 47 306 - -
Dod02g0256 307 Gene3D - 50 111 - -
Dod02g0256 307 Coils Coil 252 279 - -
Dod02g0256 307 PANTHER - 47 306 - -
Dod02g0256 307 SMART sant 46 108 IPR001005 -
Dod02g0256 307 MobiDBLite consensus disorder prediction 28 53 - -
Dod02g0256 307 ProSiteProfiles Myb-like domain profile. 50 106 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0256 Dod-Chr2 3435281 3437749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0256 48 305 Trihelix Transcription Factor Family AT2G38250 44.656 5.47e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod02g0256 Myb_DNA-bind_4 7.7e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0256 - - gmx:100812635 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0256 02 3435281 3437749 Dod02g0256 02 3435281 3437749 ECH