Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0246 ATGTCCCTCCTCAGCAGATTCTTCTACAAGCGCCCCCCAGATGGGTTACTCGAATTCATCGACAGAGTCTACGTTTTCGATTCTTGCTTCTCCACCGAAGCGTTGCCCGAAGGAATGTACCAGCTGTACCTTCACGAAGTCGTCACGGAGCTTCACGAGGAGTTTCCAGAATCTTCCTTCCTCGCCTTCAACTTCCGCGACGGCGAGAAGCGCAGCCAATTCGCCGAGTTCCTCGCCGAATACGATGTTGTCGTCATGGATTACCCCAAACAGTACGAGGGTGTTCCAATTTTGCCCCTCTCCCTGGTTCAGCACTTCCTTCGAGTCTGCGAAAGTTGGCTAACCCTAGGGAACCATCAAAATGTGATTTTGTTTCATTGTGAGAGAGGGGGTTGGCCCTTACTTTCATTTCTACTGGCGAGTTTACTTATTTTCAAAAGGGTTCATAGTGGCGAAAAAAGGACCCTTGATATGGTGCATAGAGAAGCGCCGAAGGGTTTGTTGCAGTTGCTTTCGCCGTTGAACCCTTTGCCTTCTCAGCTTCGTTACATTCAGTATGTGGCGAGGAGGAACATTGCGCCGGAGTGGCCACCGCCGGAGAGGGCGCTGTCCCTGGATTGCTTGATCTTGAGGGCAATTCCAGGTTTTGATAGCCAAAATGGGTGTAGGCCTATGGTTAGGATCTTTGGTAGGAACTTGCTCAGCAAGGGTGGGCTTTCAACTCATATGATCTATTCAATGCACAAGAAGAAGAAGAGCTTGAGGCATTACCGCCAGGCAGACTGCGATGTGATTAAGATTGATATTCAGTGTTTAGTGCAAGGAGATGTGGTGTTGGAGTGTGTTCATTTGGATTTGGATCTGGAGAGGGAAGTGATGATGTTTCGTGTGATGTTTAATACGGCATTTATTCGGTCCAACATATTGATGCTGAACACTGAAAACTTGGACATTCTTTGGGATTCGAAGGAGAGGTATCCAAAAGGCTTCAGGGCTGAGGTTTTGTTTGGGGAGGTTGAAAGCATAAGTCCCCCAAGGGCTCCGACAACCATGTTAAATGGTGAAGAGAAAGGTGGATTGCCCATTGAAGCATTTTCAAGGGTTCAAGAATTGTTTAGTGGTGTAGAATGGGTTGACAGTGGTGATGCTGCTGCCGTCTGGCTGCTTAAACAATTAACTGTCCTAAATGATGTCAAAGAGCTTTCAAGGTTGCAAGGCAAAGGAAGTTGGTATTCATCGCCTGCTGACTCTGACGAAGAAAATAATGAATCAAGCACTGCTGATAGTTCTGACGAGGCCTTTGATGTTATTCCCAAGTCATCTTTTGATCCTTCGAAATTAGTGACATCTGACACCTGCGATTCAATCCAATTAGTTACTGAGAATGATGGTGGTAATTATGAAAACATCAATTCAGGAACACCTGAGCAGTCATTGACGGATAATCTACCGTCAACTCGTCATGCTCCATGCAAGGAGTATTCTCCCTGTTCGTCTCCACCTTCACCTTCACCAGTTTCTGCTATGCAGCCTCTGGTTCCAGCACCAGTGCAAGCAACACATCCTCCTCCACCTCCACCTCCACCTCCACCTCCTCCTCCCCATTTATCTACATCCAACCAACAAACCTTTGTTCTTCCTAATAATGCTACTAGTCCACCTCCACCACCACCTCCACCGCCTCCACCTTCCATGGATCACAATGCTAGCAAGACTACTACATTGCCTCCACCTCCACCTCCACCTCCACCACCTCTTCCTATAGGTCGTAATGCAAATACTGCTCCTAGTCCACCTCCACCTCCTCCTCCGCCTCCACCTTCCATGGGTCACAATGCTAGCAAGACTACAACATTGCCTCCACCTCCACCTCCACCTCCACCACCTCTTCCTATAGGTCGTAATGCAAATACTGCTCCTAGTCCACCTCCACCTCCACCTCCTCCTGGACCTGTACAGAGAGGTTTGGCTTCCCCACCTCCCCCTCCACCTCCTCCACTACCAGTAAGAACAGGATCAGCACCACCTCCTCCTCCAGTACCTGTAAAAACAGGTTCAGCCCCCCCACCTCCGCCGCCTCCTCCACTACTTGGAAGAACAGGTTTGGCAGCAGCACCTCCTCCACTACCTGTAAAAACAGGTTCAGCCCCACCACCTCCACCTCCGCCTCCCGCGGGACCTTTGCGAACAGATGCAACATCAGCCCCACCACCTCCACCTCCACCTCCACCTCCCCTGGGACCTGTGCGAACAGGTGCAGCATCAGCCCCACCCCCACCACCTCCACCCCCTCAAGGATCTGTACGAAAGGGTTCAGGTGCACCACCTCCACCTCCACCGCCTCCGGGTGCTCGAACAGGTTCAGCTCTGCCACCTCCACCACCAGCACCAAAGCCTCCGAGTGCTCCTCCTCCACCACTTGGTCGTGGTGCAACACCAGCACCACCTCCGCCTCCTTCAGCCAGGGCCTCTGGTGTGCCACCACCACCAGGCAAAGCTTCTTTAGCACCACCAAATGTTGGAAGAGGTCGTGGTACTAGTGGGACTGCTATTGCTCCTAAGAAAACTCTGTTAAAGCCACTACACTGGGTGAAAGTCGCCCGAGCAGCACAAGGGAGTCTATGGGCTGATTCACAAAAGCAAGATAATGAATCGAGGGCCCCTGAAATAGATATATCAGAACTTGAGAGCCTGTTTTCAGCAGCATCTGCTTCTGATGGGGCTAAAGTTGTAGGTCGGCGTGGTCCTAATATCAACAAATCTGAGAAAGTACAGTTGGTTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCCAAAATTAAAATTCCTTTGCCAGATATGCTTAATGCAGTTCTTGCATTGGATTCTTCTGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCCACCAAGGAAGAGATGGAGATGTTGAAGAATTACAAAGGGAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTTATGGAGTTGATGAAGGTTCCACGTGTAGAATCCAAGTTAAGGGTTTTTGCTTTTAAAATCACCTTTTCCTCTCAGGTGAATGATTTAAGGACAAATTTGAATACAATCAACAATGCAGCTAAAGAGGTGAAAGAATCTGTAAAATTGCGTCAGATAATGCAGACTATTCTTACTTTGGGCAACGCCTTGAATCAGGGAACAGCACGGGGATCAGCAGTAGGATTCAAATTGGATAGTCTTCTTAAATTATCTGATACTCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCTGAGAAAATGCCAGAATTGCTAGATTTTGACAAAGATCTTGTCCATTTGGAAGCAGCTTCTAAGATCCAACTAAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTGGAGAAAGTTGAGCAAGAACTCACTGCCTCTGAAAATGATGGTGCCATATCTACAGGATTTCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGACGTGAGGTCACTAATATCATTGTATTCTGAAGTGGGAAGAAATGCAGATTCTTTGTCACAGTACTTTGGGGAGGATCCAGCTAGGTGCCCCTTTGAGCAAGTTACACAAATCCTTGTTGTATTTGTAAAGATGTTCAACAAGTCAAGGGAGGAGAATGAGAGGCAGGCAGATGCTGAAAAAAAGAAGCTAGAAAAAGAAGCCATGAAAGAAAAGGCAGCAAATAACGCTCACTTCAAGAAAGATATCGTTCGGTAG 3780 0.4746 MSLLSRFFYKRPPDGLLEFIDRVYVFDSCFSTEALPEGMYQLYLHEVVTELHEEFPESSFLAFNFRDGEKRSQFAEFLAEYDVVVMDYPKQYEGVPILPLSLVQHFLRVCESWLTLGNHQNVILFHCERGGWPLLSFLLASLLIFKRVHSGEKRTLDMVHREAPKGLLQLLSPLNPLPSQLRYIQYVARRNIAPEWPPPERALSLDCLILRAIPGFDSQNGCRPMVRIFGRNLLSKGGLSTHMIYSMHKKKKSLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDLEREVMMFRVMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGEVESISPPRAPTTMLNGEEKGGLPIEAFSRVQELFSGVEWVDSGDAAAVWLLKQLTVLNDVKELSRLQGKGSWYSSPADSDEENNESSTADSSDEAFDVIPKSSFDPSKLVTSDTCDSIQLVTENDGGNYENINSGTPEQSLTDNLPSTRHAPCKEYSPCSSPPSPSPVSAMQPLVPAPVQATHPPPPPPPPPPPPPHLSTSNQQTFVLPNNATSPPPPPPPPPPPSMDHNASKTTTLPPPPPPPPPPLPIGRNANTAPSPPPPPPPPPPSMGHNASKTTTLPPPPPPPPPPLPIGRNANTAPSPPPPPPPPGPVQRGLASPPPPPPPPLPVRTGSAPPPPPVPVKTGSAPPPPPPPPLLGRTGLAAAPPPLPVKTGSAPPPPPPPPAGPLRTDATSAPPPPPPPPPPLGPVRTGAASAPPPPPPPPQGSVRKGSGAPPPPPPPPGARTGSALPPPPPAPKPPSAPPPPLGRGATPAPPPPPSARASGVPPPPGKASLAPPNVGRGRGTSGTAIAPKKTLLKPLHWVKVARAAQGSLWADSQKQDNESRAPEIDISELESLFSAASASDGAKVVGRRGPNINKSEKVQLVDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSVLDIDQVENLIKFCPTKEEMEMLKNYKGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLRTNLNTINNAAKEVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISTGFRKVLKNFLDIAEADVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEKEAMKEKAANNAHFKKDIVR* 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0246 1259 SUPERFAMILY Formin homology 2 domain (FH2 domain) 922 1249 - -
Dod02g0246 1259 SMART it6_source 521 1255 IPR015425 -
Dod02g0246 1259 MobiDBLite consensus disorder prediction 573 610 - -
Dod02g0246 1259 MobiDBLite consensus disorder prediction 549 566 - -
Dod02g0246 1259 MobiDBLite consensus disorder prediction 443 485 - -
Dod02g0246 1259 Pfam Formin Homology 2 Domain 853 1221 IPR015425 -
Dod02g0246 1259 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Dod02g0246 1259 Gene3D - 197 342 - -
Dod02g0246 1259 SMART PTEN_C2_2 198 338 IPR014020 -
Dod02g0246 1259 Coils Coil 1221 1248 - -
Dod02g0246 1259 ProSiteProfiles Formin homology-2 (FH2) domain profile. 848 1246 IPR015425 -
Dod02g0246 1259 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 187 IPR029021 -
Dod02g0246 1259 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Dod02g0246 1259 Coils Coil 1127 1154 - -
Dod02g0246 1259 MobiDBLite consensus disorder prediction 406 853 - -
Dod02g0246 1259 MobiDBLite consensus disorder prediction 1226 1259 - -
Dod02g0246 1259 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 339 IPR035892 -
Dod02g0246 1259 MobiDBLite consensus disorder prediction 406 420 - -
Dod02g0246 1259 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Dod02g0246 1259 MobiDBLite consensus disorder prediction 710 835 - -
Dod02g0246 1259 Coils Coil 1025 1045 - -
Dod02g0246 1259 PANTHER FORMIN-J 712 1251 - -
Dod02g0246 1259 PANTHER FORMIN-J 1 689 - -
Dod02g0246 1259 MobiDBLite consensus disorder prediction 496 537 - -
Dod02g0246 1259 MobiDBLite consensus disorder prediction 617 701 - -
Dod02g0246 1259 Gene3D Formin, FH2 domain 847 1232 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0246 Dod-Chr2 3320593 3329781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0246 1 439 FH2 protein (formin) Gene Family AT1G31810 75.854 0.0 748
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0246 02 3320593 3329781 Dod02g0246 02 3320593 3329781 ECH