Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0243 ATGGATCAGAATCAAGATGGTGGCAACAGCGGCCCCTTGGCCAACAACCTTGTTGTCTTCTTACTTGCAATGGGTTCAGCAGCTTTTGTTGTCTCAGTTTACCACATCATAGCTATTTGTTGCTGCCACCAACACATCACTGACCAAAACCAACAACAACAACAACCACAAGGGGGTAGTGAACAAAGCACAACCTCTTCAGTAGCACACATGATTCCATCACACAAGTATCACAAGAGAAAGGTTGGTGATGGTGCTGATGATGGTGGTGGTGGTGGTGGTGGTGGCACCAGCGCTACTTGTGCAGTGTGCTTGGGAGACTTTGAGGAAGGTGAGGAGTTGAAGACTTTGCCTGAGTGCATACACTCGTTCCACGTGGCATGCATTGATATGTGGCTCCATTCTCATACTAGTTGCCCCATATGCCGTGCTAGCGCCACTCCTTCCCCTGCAGGGCTTCACCATGGCCCTTTTCAGGGTTTTGATCATAGTGGTGGTGATTCGAATGCAAATCACAGTAGCATTGACATGGTGCAAATTTCTGTTGTCCAAAATGGGTTGGTAAGAAGGGGTGGGGTTCTGGTGAAGATTTTTCTTAATAGGAGTGGTACCCCATGCATCCAATTGAAAGATGGGGTTCATTATTACTACAGCAATGGCATTTCCTTAGTTATACTTGTGCACAAATTTCACACAAATATAAGGAACCTAGATAAGGAATTCATGGAGTTTGGGAGGGACCTAGATAAGGAATTGTGGAAAAGGTCAAGGGATTCGAGGGACTTAAGGGTGGTTATGGAGGAAGGGGTTGCGCTCGAGAAGAAGTTGGATCAAAGTGTTAAGAAGTTCATGAAGCATGGGAGACCACAGCACCACAGCAAGCAATAA 888 0.4628 MDQNQDGGNSGPLANNLVVFLLAMGSAAFVVSVYHIIAICCCHQHITDQNQQQQQPQGGSEQSTTSSVAHMIPSHKYHKRKVGDGADDGGGGGGGGTSATCAVCLGDFEEGEELKTLPECIHSFHVACIDMWLHSHTSCPICRASATPSPAGLHHGPFQGFDHSGGDSNANHSSIDMVQISVVQNGLVRRGGVLVKIFLNRSGTPCIQLKDGVHYYYSNGISLVILVHKFHTNIRNLDKEFMEFGRDLDKELWKRSRDSRDLRVVMEEGVALEKKLDQSVKKFMKHGRPQHHSKQ* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0243 295 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 148 IPR013083 -
Dod02g0243 295 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Dod02g0243 295 CDD RING-H2_PA-TM-RING 100 143 - -
Dod02g0243 295 SUPERFAMILY RING/U-box 100 149 - -
Dod02g0243 295 SMART ring_2 101 142 IPR001841 -
Dod02g0243 295 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 9 190 - -
Dod02g0243 295 Pfam Ring finger domain 100 143 IPR001841 -
Dod02g0243 295 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 9 190 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0243 Dod-Chr2 3278482 3281987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0243 17 147 C3H Transcription Factor Family AT1G04360 30.986 4.25e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0243 - - aip:107639941 230.72