Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0221 ATGGCCATGGCTGATTCAACCTCTAGTCTGTTGAGGGTGGAGCAGATAGCAGGCAAAGGGAGGGGCCTAGTTGCAGCTCAGCCTCTCAAAGCAGGCCAAGTAGTCCTCAAAGAATCCCCTCTCATTCTCTACTCAGCTTCCCCTCTAATCTCCACTGCTCCCTCTTCCTCATCACCCTTCTCTTACTGTGACCACTGCTTCAGAATCCTCCCACCTTCACCACCACACACTGAAAGCAATACTGTTGCATGCCCTTCTTGCCTCAACCACAAGTTTTGCAGCCAGAAATGCCTCTCCATTGCCCTCAACTCCTCACACTCTGCCTTTGTGTGCCAAGCATTGCTGTCACTTCTCAAAGACTCATCAAGTTCACCACTTTTTCAACAACAACCCCTTGAACGCCAAGTCCAAGCCCGTCTTGTTGTTGCTTGCTATAACCTTTCCATCATGTCCCCTTCTGATATTCACACTTTGCTTTCCCTTCATGGCACCCCAGATGAGTCCATTCTTGATGCTGCTAAGTTCCTTCATTCTATAATCTCACCCCCTTTCCAAACAAAGTGCCAGCTTTCTGTTGATCTCATTGCTCAGCTTCTTGCCAAGGACAGGCTCAATTCATTCTGCTTGATGGACCCTTATTCCCCAGATGGCCCTCAAAGATCCATCAAGGCTTATGGCATATACCCAAAAGCCACTATGTTCAACCATGACTGTGTTCCCAATGCATGCAGGTTTGATTATGTGGACACAAGTGACCCTGGTGATGAGCACAACACTGACATGATCATTAGGATGATTAGGGGTGTTGCTCAAGGGGAAGAGGTCTGCATAAGCTATTTCAGGATTGGGAGGGATTACCCCACAAGGAAGAGGATCTTGATGGAGGATTATGGGTTCACTTGTGGATGTGATAGGTGCAAGGTTGAAGCAAGTTGGCCTAATGGCCTAAACCAAGGAGGGAACAGTGATCTGCCACATGTGAGGTTCCTTAACAAGTATGTTTGTGAGACTAAGAACTGTGCAGGCACTCTGGCTCCTCTTCCACCAAAAGGTGATGCACCATCTAATGTTCTGGAGTGTAATTTCTGTGGCAATTTGAAAAATGATGCTTATTAG 1116 0.4722 MAMADSTSSLLRVEQIAGKGRGLVAAQPLKAGQVVLKESPLILYSASPLISTAPSSSSPFSYCDHCFRILPPSPPHTESNTVACPSCLNHKFCSQKCLSIALNSSHSAFVCQALLSLLKDSSSSPLFQQQPLERQVQARLVVACYNLSIMSPSDIHTLLSLHGTPDESILDAAKFLHSIISPPFQTKCQLSVDLIAQLLAKDRLNSFCLMDPYSPDGPQRSIKAYGIYPKATMFNHDCVPNACRFDYVDTSDPGDEHNTDMIIRMIRGVAQGEEVCISYFRIGRDYPTRKRILMEDYGFTCGCDRCKVEASWPNGLNQGGNSDLPHVRFLNKYVCETKNCAGTLAPLPPKGDAPSNVLECNFCGNLKNDAY* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0221 371 SUPERFAMILY SET domain 8 301 IPR046341 -
Dod02g0221 371 Gene3D - 62 128 - -
Dod02g0221 371 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 4 370 - -
Dod02g0221 371 SMART set_7 9 286 IPR001214 GO:0005515
Dod02g0221 371 CDD SET_SMYD 204 306 - -
Dod02g0221 371 Pfam SET domain 20 279 IPR001214 GO:0005515
Dod02g0221 371 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 4 370 IPR044238 -
Dod02g0221 371 ProSiteProfiles SET domain profile. 9 280 IPR001214 GO:0005515
Dod02g0221 371 Gene3D - 129 206 - -
Dod02g0221 371 Gene3D SET domain 22 307 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0221 Dod-Chr2 3097802 3099119 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod02g0221 SET 9.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0221 - - gmx:100808530 515.383