Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0220 ATGAGCGTTCCTCCTGTGGCGTGGCAACAGGCGGCGCCGTTCACGGTGGCGCAGTGGCAGGAGCTGGAGCACCAGGCCCTCATCTTCAAGTACCTCAAGGCAGGCCTCGCAGTCCCGCCCGACCTCCTCTTACCCATTCGGAGGAGCCTCCAGTTGATGTCTCCCAAGCTCCCTCACTCTCTCCACTACCCATCCCTGGGGTTTTATGGGAAGAAGATAGATCCGGAACCAGGGAGGTGCAGGAGGACGGATGGGAAGAAGTGGAGGTGCTCGAGGGATGCCCACCCTGACTCCAAGTACTGCGACCGCCACATGATTCGCCGTCGTTACCGTTCAAGAAAGCCTGTGGAATCTTCTTCTTCTTCATCTCAACAACAGCAACAACAACCACCACCTCAATCTCAATCTCAATCTTCTTCTACTACTACTTCTCAGCTTTCTACTACTGGTGCTGCTGGCTCTGCTTCTGGAACCTTCCACACTCTCCCTTTGCACACTAATGGTACCCGTGAAGGTTTCACCCTTGGGAGCACCAACAACAGCAGCAGCAGCAGCGGTAATAACAGTTTGCAGCATCATCTCCAGATGGACCCTTTGTCACTCCCCGGTGAGGTTAGCAAGAAAGAGTTCAGGTTTGCACTGAACTCCGAAGCAGATGAGCATAATTTCTTGCAGAAAGATCTGGGAAGTGTGAGATATCAAGGTTATGACTTCACCTCAGATGGCATGTGGTCCATGTCTCAGATTCCATCCAACACTGTTTCAGAATCAAGAACTGGTTCCACTATGGTTGGTGACTGCTCTGAGCTGTTGAATCTCAATGCTGCGAGGTCCAAAGAACTTGTCTTTAGCGGCCAGTTAAGTTCAGCAGGGTGTTTGAAACAGGAGTATCAGTCCCCTCATTCTCTCTTCAGTGACTGGCACTGGAAGAAGGATTTAGGCTCTGATGCCATTGTGTATAGGCCCAGCAAAGATTTCAACTCAGATGCCAATGTTGATTGCAATGGTTCTTTGTAA 1017 0.5093 MSVPPVAWQQAAPFTVAQWQELEHQALIFKYLKAGLAVPPDLLLPIRRSLQLMSPKLPHSLHYPSLGFYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESSSSSSQQQQQQPPPQSQSQSSSTTTSQLSTTGAAGSASGTFHTLPLHTNGTREGFTLGSTNNSSSSSGNNSLQHHLQMDPLSLPGEVSKKEFRFALNSEADEHNFLQKDLGSVRYQGYDFTSDGMWSMSQIPSNTVSESRTGSTMVGDCSELLNLNAARSKELVFSGQLSSAGCLKQEYQSPHSLFSDWHWKKDLGSDAIVYRPSKDFNSDANVDCNGSL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0220 338 Pfam QLQ 13 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod02g0220 338 PANTHER - 1 333 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dod02g0220 338 Pfam WRC 75 117 IPR014977 -
Dod02g0220 338 PANTHER GROWTH-REGULATING FACTOR 1 333 - -
Dod02g0220 338 MobiDBLite consensus disorder prediction 73 194 - -
Dod02g0220 338 ProSiteProfiles WRC domain profile. 74 118 IPR014977 -
Dod02g0220 338 MobiDBLite consensus disorder prediction 116 194 - -
Dod02g0220 338 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod02g0220 338 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod02g0220 338 MobiDBLite consensus disorder prediction 74 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0220 Dod-Chr2 3090763 3094352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0220 13 117 GRF Transcription Factor Family AT3G13960 60.177 2.67e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dod02g0220 WRC 2.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0220 - - ahf:112747495 485.337