Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0213 ATGGGGAGTAGCTATGTTGGTGGTGGTGGTGATGGAGGAAGAGAAGGTGGATGTGGTGGATATGGGGTGGTGATGACGATGACGAGAGAGCCAAAGCCGAGGCTGAGGTGGACAGCTGATCTTCATGACCGTTTTGTGGACGCCGTCACAAAGCTTGGTGGCCCCGACAAGGCGACTCCCAAGTCTGTTCTAAGGATAATGGGCTTGAAAGGTTTGACATTATACCATTTGAAGAGCCACTTACAGAAGTATAGACTTGGACAGCAGGCTCGAAAACAAAATGAAGAACATCACAAAGAGAACAATAGATGTTCATATGTAAATTTCAGCAATCACTCTTCAGGGCTTAACACCAGTTACAGTGGTGATAATGATGAAAGAGGAGAAATCCCAATAACGGAAGCACTGAGGCATCAGATTGAAGTCCAAAAGAGATTGGAGGAGCAGCTTGAGGTCCAGAAGAAATTGCAGATGAGAATAGAGGCTCAAGGGAAGTATTTGCAAGCTGTGTTAGAGAAAGCCCAGAGGACCCTTTCCTTGGATGGACCAGGCAATCTAGAAGCATCAAAAGCTCAATTGACTGAATTCAACTCTGCCTTGTCAAATTTCATGGAAAATATGAATAAAGATAGCAAAGAAAACATAGTAGACATGAATGGTTTTTATAATAAGGGCCACGGTTCAGCTTTCCATTATCAAGAAGTAGGAAGGGAAGAAAATTTGGATCAAAAGCCTAAGATTGAAGGGGGTTCAGTACAGTTTGACTTAAACATCAAAGGTAGCTATGACCTTGTATCTGCAAGTGGAGCTGAAATGGAAGCCAAGATGCTTTCGTACAGGCTATAA 846 0.4326 MGSSYVGGGGDGGREGGCGGYGVVMTMTREPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRIMGLKGLTLYHLKSHLQKYRLGQQARKQNEEHHKENNRCSYVNFSNHSSGLNTSYSGDNDERGEIPITEALRHQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAVLEKAQRTLSLDGPGNLEASKAQLTEFNSALSNFMENMNKDSKENIVDMNGFYNKGHGSAFHYQEVGREENLDQKPKIEGGSVQFDLNIKGSYDLVSASGAEMEAKMLSYRL* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0213 281 MobiDBLite consensus disorder prediction 89 103 - -
Dod02g0213 281 SUPERFAMILY Homeodomain-like 31 89 IPR009057 -
Dod02g0213 281 Pfam Myb-like DNA-binding domain 35 85 IPR001005 -
Dod02g0213 281 Pfam MYB-CC type transfactor, LHEQLE motif 131 177 IPR025756 -
Dod02g0213 281 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 32 87 IPR006447 GO:0003677
Dod02g0213 281 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 23 269 - -
Dod02g0213 281 Gene3D - 31 89 - -
Dod02g0213 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 89 IPR017930 -
Dod02g0213 281 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 23 269 IPR044848 GO:0003700
Dod02g0213 281 Coils Coil 143 163 - -
Dod02g0213 281 MobiDBLite consensus disorder prediction 88 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0213 Dod-Chr2 2870973 2874928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0213 5 202 G2-like Transcription Factor Family AT3G24120 49.261 7.59e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod02g0213 DUF3617 0.00038 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0213 - - gmx:100810146 439.499