LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod02g0209	ATGGCTGCGAATGTGAACTGTGACATGCCACAAAACACAAGCACCCTTTCGCACCCTCATTGGTACTCACCAAAAACTGGCATTTACCATAGCAAACACGCCCCTTTGGAGCTTCCTGAAGACCCTTTTCTCGACCTTGTTTCCTTCATTTTTTCCCATCCTCATGATGGGGTTTCAGCCCTTATTGATTCCTCATCTGGGTGTTCCATTCCTTACCCAAAGTTGCAGCCTTTGGTGAAATCCATGGCCTATGGTCTTCACAAAATGGGTGTTTCACAAGGTGATGTGGTCTTGCTCCTGCTCCCTAATTCCATTTACTATCCTATAGTGTTGTTGGGTGTTCTGTATCTAGGTGCTGTTGTTACACCATTGAATCCTCTCAGTAGTGTGTCAGAGATATATAAACAAATCAATGATTGCGGTGTGAGTATGGTTTTCACTGTGCCTGAAAATGTCAAAAAACTAGAGCCATTGGGCATTCCCACTGTCTCTGTGCCAGAAAATGAAAAGGGTTTGAAGCTTGAATGTTTCTCAAGTTTTTGTAACTTGATTTCTAGTGATTTTGATTTGCCTATGAAGCCAGTTATTCAACAGGAAGACACTGCTGCCATATTGTATTCTTCAGGGACTACTGGTGTGAGCAAAGGAGTTGTTCTAACACATAAGAACTTTATCTCTATGGTTGAGTTTTTTGTGAGGTTTGAAGCTTCTCAATATGAGTACTCTTGCTTGAACAATGTGTTTCTAGCTGCTCTGCCAATGTTCCATGTTTATGGTTTATCTTTCTTCGCTTTGGGATTACTGTCTTTGGGTTCTACAGTCATTGTTATGAGGAAATTTGATATTGATGAAGCTATCATGGCAATTGACAAGTATAAAGTTACACACTTCCCTGTTGTTCCACCAATGTTGACAGCATTGACAAAGAGGGAAAAGGGTGTTAATGGAAGTAAGTTGCAGAGTTTGATACAGGTTTCCTGTGGTGCAGCACCGTTGAGTGGGAGTGTTATCAAAGACTTTGTGCAAGCTTTCCCTCATGTTGATTTTATACAGGGTTATGGAATGACTGAGTCGACTGCAGTAGGAACACGTGGCTTCAATACTGTAAGGTTTTGCAATTATTCTTCAATAGGGTTGTTAGCTCCAAACATGGAGGCAAAAGTGGTTGACTGGAATAGTGGTGCATTTATGCCCCCAGGAAGCAGCGGTGAGCTTTGGTTGAGAGGGCCTGCAATTATGAGAGGGTACTTGAATAATGAGGAAGCCACAATGTCAACAATTGATAAAGATGGTTGGCTGCGTACTGGAGATGTTGTTTATTTTGACCAGGATGGGTATTTGCATATATCAGACCGCTTGAAAGATATTATCAAATACAAGGGCTTTCAGATTGCCCCTGCTGATTTAGAAGCTGTGTTAATATTGCATCCAGAAGTTGTTGATGTTGCTGTTGCAGGCGCCATGAATGAAGAAACTGGGGAGATGCCAGTGGCATTTGTGGTCAGGAAGGTTGGAAGTATGCTTTCTGCGAACGATATTATGGATTATGTTGCTGAACAGGTTGCTCCACACAAGAAGATTAGGAAAGTGGTTTTCATTGACAAGATACCAAGGTCTCCAACTGGGAAGATCCTTCGAAGGCAGCTGAAGAATTACTTGACTTCTAAACTCTAA	1674	0.4188	MAANVNCDMPQNTSTLSHPHWYSPKTGIYHSKHAPLELPEDPFLDLVSFIFSHPHDGVSALIDSSSGCSIPYPKLQPLVKSMAYGLHKMGVSQGDVVLLLLPNSIYYPIVLLGVLYLGAVVTPLNPLSSVSEIYKQINDCGVSMVFTVPENVKKLEPLGIPTVSVPENEKGLKLECFSSFCNLISSDFDLPMKPVIQQEDTAAILYSSGTTGVSKGVVLTHKNFISMVEFFVRFEASQYEYSCLNNVFLAALPMFHVYGLSFFALGLLSLGSTVIVMRKFDIDEAIMAIDKYKVTHFPVVPPMLTALTKREKGVNGSKLQSLIQVSCGAAPLSGSVIKDFVQAFPHVDFIQGYGMTESTAVGTRGFNTVRFCNYSSIGLLAPNMEAKVVDWNSGAFMPPGSSGELWLRGPAIMRGYLNNEEATMSTIDKDGWLRTGDVVYFDQDGYLHISDRLKDIIKYKGFQIAPADLEAVLILHPEVVDVAVAGAMNEETGEMPVAFVVRKVGSMLSANDIMDYVAEQVAPHKKIRKVVFIDKIPRSPTGKILRRQLKNYLTSKL*	558

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Dod02g0209	557	Gene3D	-	455	555	IPR045851	-
Dod02g0209	557	Pfam	AMP-binding enzyme	59	459	IPR000873	-
Dod02g0209	557	CDD	4CL	38	549	-	-
Dod02g0209	557	SUPERFAMILY	Acetyl-CoA synthetase-like	58	554	-	-
Dod02g0209	557	Pfam	AMP-binding enzyme C-terminal domain	469	543	IPR025110	-
Dod02g0209	557	PANTHER	4-COUMARATE--COA LIGASE-LIKE 6	15	556	-	-
Dod02g0209	557	ProSitePatterns	Putative AMP-binding domain signature.	204	215	IPR020845	-
Dod02g0209	557	Gene3D	-	27	454	IPR042099	-
Dod02g0209	557	PANTHER	LONG-CHAIN-FATTY-ACID--COA LIGASE	15	556	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod02g0209	Dod-Chr2	2842609	2846304	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod02g0209	12	557	Monolignol Biosynthesis Gene Families	AT4G19010	59.199	0.0	680

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod02g0209	K01904		-	gmx:100804808	889.797

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod02g0209	02	2842609	2846304	Dod02g0209	02	2842609	2846304	ECH

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