Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod02g0186 | ATGGGCAGTAGTGAGATGGATAAAACCCCAAAAGAGAAGGATTCTAAGACGCCTCCACCTACATCACAGGAACAGTCATCCACCACCAGTGCTGGAACAATTAATCCTGACTGGTCCAGCTTTCAGGCATATTCTCCTATACCCCCACATGGGTTCTTGGCGTCAAGTCCCCAAGCCCACCCATATATGTGGGGCGTCCAGCATATTATGCCTCCCTATGGTACTCCACCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTCAGCCCTTTTGCCATGCCTTCTCCAAATGGTATTGCTGAGGCTTCAGGAAATACTCCTGGCAGCATGGAAGCTGATGGTAAACCTCCTGAGGTGAAGGAAAAACTTCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACAGGGAAAAATAATGAACATGGCAAAACACCAGGGACATCTGCTAATGGAATTCATTCAAAGAGTGGTGAGAGTGCAAGTGAAGGTACCAGTGAAGGAAGTGATGCCAATTCTCAGAATGACTCCCAATTGAAATCAGGAGGCAGGCAGGATTCTTTTGAAGATGAACCATCTCAAAATGGCAGTTCAGTGCATGCACCTCAAAATGGGGGACTTAATACACCTCATACGGTGGTTAATCAAACTATGTCTGTCATGCCTATCACTGCTGGTGGTACTCCTGGAGCAGTGCCTGGTCCCACAACAAACTTAAATATAGGAATGGATTATTGGGGCACACCAACATCTAACATTCCTGCACTGCGCGGAAAGGTTCCATCTACTGCAGTTGCCGGAGGGATGGTTACTGCTGGATCACGGGATAGTGTTCAGTCACAACTTTGGATACAGGACGAAAGAGAGCTTAAAAGGCAAAGACGGAAGCAGTCTAACAGGGAATCTGCTCGCAGATCCAGGTTGCGCAAGCAGGCTGAATGTGATGAGCTAGCTCAGCGTGCTGAGGTATTGAAAGACGAAAATGCTTCTCTCCGGTCAGAAGTAAGTCGGATCAGGAGTGACTATGAGCAGCTACTCTCCGAGAATGCAGCTCTTAAGGAGAGACTTGGCGAACTGCCTGGGAATGATGATCTTAAGTCTGGAAGGAATGATCAGCCTGTGGATAATGACACTCAACAAAGTGGGCAGGCAGAGGCCGTGCAGGGTGGTCATTAG | 1227 | 0.4743 | MGSSEMDKTPKEKDSKTPPPTSQEQSSTTSAGTINPDWSSFQAYSPIPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPFSPFAMPSPNGIAEASGNTPGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNNEHGKTPGTSANGIHSKSGESASEGTSEGSDANSQNDSQLKSGGRQDSFEDEPSQNGSSVHAPQNGGLNTPHTVVNQTMSVMPITAGGTPGAVPGPTTNLNIGMDYWGTPTSNIPALRGKVPSTAVAGGMVTAGSRDSVQSQLWIQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKDENASLRSEVSRIRSDYEQLLSENAALKERLGELPGNDDLKSGRNDQPVDNDTQQSGQAEAVQGGH* | 409 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod02g0186 | 408 | MobiDBLite | consensus disorder prediction | 19 | 42 | - | - | |
| Dod02g0186 | 408 | CDD | bZIP_plant_GBF1 | 309 | 359 | IPR045314 | GO:0003700|GO:0006355 | |
| Dod02g0186 | 408 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 311 | 326 | IPR004827 | GO:0003700|GO:0006355 | |
| Dod02g0186 | 408 | Coils | Coil | 324 | 372 | - | - | |
| Dod02g0186 | 408 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 306 | 369 | IPR004827 | GO:0003700|GO:0006355 | |
| Dod02g0186 | 408 | MobiDBLite | consensus disorder prediction | 370 | 408 | - | - | |
| Dod02g0186 | 408 | Pfam | G-box binding protein MFMR | 1 | 96 | IPR012900 | - | |
| Dod02g0186 | 408 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
| Dod02g0186 | 408 | SMART | brlzneu | 304 | 368 | IPR004827 | GO:0003700|GO:0006355 | |
| Dod02g0186 | 408 | Gene3D | - | 307 | 360 | - | - | |
| Dod02g0186 | 408 | PANTHER | BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN | 1 | 408 | - | - | |
| Dod02g0186 | 408 | MobiDBLite | consensus disorder prediction | 374 | 388 | - | - | |
| Dod02g0186 | 408 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Dod02g0186 | 408 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 1 | 408 | IPR044827 | GO:0003700|GO:0006355|GO:0043565 | |
| Dod02g0186 | 408 | Pfam | Disordered region downstream of MFMR | 135 | 269 | - | - | |
| Dod02g0186 | 408 | MobiDBLite | consensus disorder prediction | 389 | 408 | - | - | |
| Dod02g0186 | 408 | MobiDBLite | consensus disorder prediction | 111 | 229 | - | - | |
| Dod02g0186 | 408 | MobiDBLite | consensus disorder prediction | 306 | 328 | - | - | |
| Dod02g0186 | 408 | MobiDBLite | consensus disorder prediction | 146 | 229 | - | - | |
| Dod02g0186 | 408 | Pfam | bZIP transcription factor | 304 | 366 | IPR004827 | GO:0003700|GO:0006355 | |
| Dod02g0186 | 408 | SUPERFAMILY | Leucine zipper domain | 307 | 363 | IPR046347 | GO:0003700|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod02g0186 | Dod-Chr2 | 2652206 | 2659704 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod02g0186 | 1 | 402 | bZIP Transcription Factor Family | AT2G35530 | 64.146 | 7.97e-171 | 482 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | bZIP | Dod02g0186 | MFMR_assoc | 5e-61 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod02g0186 | K09060 | - | gmx:778122 | 711.064 |