Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0185 ATGATGAGTGCAGTAGTAGCCACTCGCCAGCCACCGAAGCTAGCCAGCATTGCATTTCAATTTCCCCACAAATCCAATAAACCTCAGCAAAACCCAACCCTATTTGATCTAATTTCACCCTTCGCCACTTTCAATCCCAACTACAAATCAAATCAATGGCAGCAACATCAGAAGGAGACAAACAAGAAGCCCTACGCCTCAAGTCACTCGCAGAGTCCAAATTCAAATCCTCCAAAGACCTCAAATCCGCCCTCAAATACGCGAAGCGGTCCCACCGCATCGCCCCCAACCTCCCCGGCGTGGCGGAGGACCGTGGCCGCCCTCACCGTCCTCCGCGCGGCCGCCAAGTCCCCCTCCCCCGACTGGTACGGCGTCCTCGGCGCCGAGCCCTTCGCCCCCGCCGCGTCCCTCCGTAAGCAGTACAAGAAGCTCGCCCTCCTCCTCCACCCCGACAAGAGCCCCTCCGTGGCATCCGACGAGGCCTTCAAGCTCGTCGCCGAGGCCTTCCGGCTGCTCTCCGACAGGGCCTGGAAGAAGGACTACGATGCCAAGCTCAGGTTGAGGATTCAGGAGGAGAAGGAGAAGGAGGCTGAAGAGGAGAGGGAGACTTTCTGGACTGCATGCTCCACTTGCAGGCTCTTGCACCAGTTTGAGAGGAAGTATGTAGGGCATAATCTGGTGTGCCCCAGTTGCAGGAAGAGCTTTAAGGCTGTGGAGGTGGTTGAGGATGATGATGGATCTAAGGAGGAGGAGGAGGAGGAAGAGAAGAAAGGGAGGGTTAAGGGTAGGAGTGGGAGGTCGAAATTGAAAGATAAGGTGGATGATGATGAGAAATTGGGGGACTTTGTGTCGAGGAGAAAATCCAAGAGTGTGAAAGGGAAAGTGGGTAGTGAAAAAGGTGGAGATTTGAGGAGGAGTTTGGTTTCAAAGGATAATGTTGAGGGTGATGGAGTGCGGGATGGGGATCCAGAGAGTGAAAGAGAGGGCGGTGGTGAATGGGGTGGTGGAAGGTTGAGAAGTGGGGGTTTAAGGAAGAGGATGCGTACTGTTGGGGAGGTGTTGGAGAGGTCCAAACCGAAGAAGGTTAAAACTGGGGAGGAAACTATGACATTGGCTGAGTTTCAGTCTGAATTGAAGAGAAAGGCTCAGCAGAAGAAAGTGAAGGTGACAATGAAGAAAAATGAAGAGGATAGAACAGTGAAGAGGAGCCAGCAGGGGAAGAGACTTGGGGGGTCGAAAAATAATAGGGGTTTAGAGGTTGGGAAAGGTACGAGTATGAAGAAGACTGTGAAGCTAGCAATCAAGGAGAAGAAAGAGGCTTCTGTAAAGAGAAAGGGATTGAGACTTGAGAAACACAGGGATTCTGGTGGAGAGGACTCCGGGAACATGGCAGTGGTGGATTCAGATTTTTATGATTTTGACAAAGACAGAACTGAGAGAAGCTTTAAGCAAGGTCAAGTTTGGGCTGTATATGATGATGATGATGGAATGCCAAGGCACTACGCCTTGATTGATGAAGTTGTTTCAGTAAATCCTTTTGAAGCGAGAATTAGCTGGTTAGATCCACAAAACAATGGGGATGAAAAGATGATTAGTTGCATGAAAATGGGGTTTCACATACCTTCTGGGAAATTTAAAATTGCCCGAAAGGATTCCGTTAATTCAGTAAATATATTTTCTCATGTTGTGGACTGTGACCGGGCAGCACGTGAGGTTTACCAAATTTATCCAAAGAAGGGCTCAGTATGGGCACTTTATGGTAAGGCAACTCTTGATGCAGATGGAAAAACTTTTGTTGCCATGGGCAAGAGATGCTATGACATTGTTGTGTTTTTGACAAGTTACAGTGAGAGCAATGGTCTGAGCATGGCATATCTTGAGAAGGTTGATGGCTACAAGACGGTATTTAAGAGACAAGAGATGGGGAGTCATGCTATTAGATTTCTTGGGAAGGATGACATCTGGTTCGTTTCTCATCATATTCCTGCACGGAAATTGCCTTGTAATGATATTCCGGAGCTTTTGAAAGACTGTTGGGAACTTGACCCTGCTTCGCTTCCTTCAGATTTACTTACTGTTGGTGGCATTGATCACAGAGCTTAG 2103 0.4869 MMSAVVATRQPPKLASIAFQFPHKSNKPQQNPTLFDLISPFATFNPNYKSNQWQQHQKETNKKPYASSHSQSPNSNPPKTSNPPSNTRSGPTASPPTSPAWRRTVAALTVLRAAAKSPSPDWYGVLGAEPFAPAASLRKQYKKLALLLHPDKSPSVASDEAFKLVAEAFRLLSDRAWKKDYDAKLRLRIQEEKEKEAEEERETFWTACSTCRLLHQFERKYVGHNLVCPSCRKSFKAVEVVEDDDGSKEEEEEEEKKGRVKGRSGRSKLKDKVDDDEKLGDFVSRRKSKSVKGKVGSEKGGDLRRSLVSKDNVEGDGVRDGDPESEREGGGEWGGGRLRSGGLRKRMRTVGEVLERSKPKKVKTGEETMTLAEFQSELKRKAQQKKVKVTMKKNEEDRTVKRSQQGKRLGGSKNNRGLEVGKGTSMKKTVKLAIKEKKEASVKRKGLRLEKHRDSGGEDSGNMAVVDSDFYDFDKDRTERSFKQGQVWAVYDDDDGMPRHYALIDEVVSVNPFEARISWLDPQNNGDEKMISCMKMGFHIPSGKFKIARKDSVNSVNIFSHVVDCDRAAREVYQIYPKKGSVWALYGKATLDADGKTFVAMGKRCYDIVVFLTSYSESNGLSMAYLEKVDGYKTVFKRQEMGSHAIRFLGKDDIWFVSHHIPARKLPCNDIPELLKDCWELDPASLPSDLLTVGGIDHRA* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0185 700 MobiDBLite consensus disorder prediction 378 404 - -
Dod02g0185 700 ProSiteProfiles dnaJ domain profile. 121 185 IPR001623 -
Dod02g0185 700 Coils Coil 182 202 - -
Dod02g0185 700 SUPERFAMILY Chaperone J-domain 115 186 IPR036869 -
Dod02g0185 700 PRINTS DnaJ domain signature 141 156 IPR001623 -
Dod02g0185 700 PRINTS DnaJ domain signature 123 141 IPR001623 -
Dod02g0185 700 PRINTS DnaJ domain signature 157 177 IPR001623 -
Dod02g0185 700 MobiDBLite consensus disorder prediction 373 426 - -
Dod02g0185 700 MobiDBLite consensus disorder prediction 252 333 - -
Dod02g0185 700 Pfam Domain of unknown function (DUF3444) 462 666 IPR024593 -
Dod02g0185 700 MobiDBLite consensus disorder prediction 48 99 - -
Dod02g0185 700 Pfam DnaJ domain 121 182 IPR001623 -
Dod02g0185 700 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 96 694 - -
Dod02g0185 700 PANTHER BNAC03G44070D PROTEIN 96 694 - -
Dod02g0185 700 Gene3D DnaJ domain 109 211 IPR036869 -
Dod02g0185 700 MobiDBLite consensus disorder prediction 242 348 - -
Dod02g0185 700 MobiDBLite consensus disorder prediction 48 100 - -
Dod02g0185 700 CDD DnaJ 121 174 IPR001623 -
Dod02g0185 700 SMART dnaj_3 120 177 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0185 Dod-Chr2 2643485 2647050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0185 103 274 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.016 1.43e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0185 - - aprc:113869037 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0185 02 2643485 2647050 Dod02g0185 02 2643485 2647050 ECH
Dod05g0112 05 1596565 1601241 Dod02g0185 02 2643485 2647050 PCT