Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0175 ATGGAGCTATTCCCAGCACAACCAGACTTGTCCTTGCAAATCAGCCCTCCAAACACAAAACCCACATCAAAGACTTGGATGAGAAACACAGCAACAGCAGAAGGAGAGGTTGATTTGGGGTTCTGGAAGAGAGCCTTGGACTCAAGAAACTCCCTATCATCATCAATGGCCAAAACCGACAACATCAACAGCAACAACAACGGCACATGCTTATTCGACCTCTCACTCTCAAACCCAACAACAAGGACTTCATCAGACTCCATCAACAGTTCCAACAACCGCATTCACCACTACTTCCAATACGGTAATGCTAGCAACAACCACCCCTTCCAATCGTTTCAGCAGAACCATCATCATCACCATTATTTTCAGCATCAGCAGCATCAGCCACTGTTCCAACCACAGCAACAACAACACCAAAGCTTAAGCCAAGAACTGGGTTTTCTGAGACCAATACGAGGGATTCCAGTGTATCAGAACCCTCCTCCTTTGCCATTTGCTCAGAACCATCATCTTCTAGAAGCTTCTCCCACCACCCCTTCATCAGTCCCCAGCACAATAACCACAGGTTCTTCGACCCATTTTCAGTCACAGGCTCTGATGCGGTCGAGGTTCTTGTCACGCTTCCCTGCAAAGAGAAGCATGAGAGCTCCCAGGATGCGTTGGACTACCACACTCCATGCTCGCTTTGTTCATGCCGTTGAGCTATTAGGTGGCCATGAAAGGGCTACACCAAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCACATGTTAAGTCTCATTTACAGATGTACCGGACGGTGAAAACTACAGATAGAGCAGCAGCTTCTTCAGGGCAATCCGATGTATATGATAATAGATCATCTGGAGATACTTCTGAAGACTTAATGTTTGATGTCAACTCTTCAAGGAGGTCTGATCTATCCATTAAGCAGGGAATACCAGGTGTGAATCAAGATAAGGAATATCATGGGCTTTGGAGCAACTCTTCCAGGGAAGCTTGGTTGCATGGCAAGCCAAAGGCTGATTCTGTTGGGGACGTGCCTTCCCTTGAGAAGGAAATGGATCCAAAGTGCCTAAGCTACGAGAGGCTATCAGATGGAAGCTCATCCTCAAACCTGTCAGCATCAGGCCCCAAGAAACGTAATTTGGATTTGGAGTTTACATTGGGGCAGCCACTTTGA 1197 0.4662 MELFPAQPDLSLQISPPNTKPTSKTWMRNTATAEGEVDLGFWKRALDSRNSLSSSMAKTDNINSNNNGTCLFDLSLSNPTTRTSSDSINSSNNRIHHYFQYGNASNNHPFQSFQQNHHHHHYFQHQQHQPLFQPQQQQHQSLSQELGFLRPIRGIPVYQNPPPLPFAQNHHLLEASPTTPSSVPSTITTGSSTHFQSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNRSSGDTSEDLMFDVNSSRRSDLSIKQGIPGVNQDKEYHGLWSNSSREAWLHGKPKADSVGDVPSLEKEMDPKCLSYERLSDGSSSSNLSASGPKKRNLDLEFTLGQPL* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0175 398 MobiDBLite consensus disorder prediction 368 383 - -
Dod02g0175 398 MobiDBLite consensus disorder prediction 366 398 - -
Dod02g0175 398 Gene3D - 217 274 - -
Dod02g0175 398 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 397 - -
Dod02g0175 398 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 218 271 IPR006447 GO:0003677
Dod02g0175 398 MobiDBLite consensus disorder prediction 276 300 - -
Dod02g0175 398 SUPERFAMILY Homeodomain-like 215 271 IPR009057 -
Dod02g0175 398 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 397 IPR044847 GO:0000976|GO:0006355|GO:0010158
Dod02g0175 398 Pfam Myb-like DNA-binding domain 219 270 IPR001005 -
Dod02g0175 398 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0175 Dod-Chr2 2487495 2493004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0175 136 397 G2-like Transcription Factor Family AT4G17695 44.043 8.72e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod02g0175 Myb_DNA-binding 1.9e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0175 - - aprc:113868756 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0175 02 2487495 2493004 Dod02g0175 02 2487495 2493004 ECH