Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0174 ATGGTGGAAGGACGAGTGCGTTTATCTAAGGAAGCTAGAAATGGGTTAGAAATTTTGAAGCGTAAAAGGCTAGAGCGAGCAAAGTCTGCCACTGTGACTGACAAAAGTGTAGCTAACATGATGAACAGAAGTGGTGGAGATGCTCTAAGAGCTTCTGCTTCATGTGGTGTGAGATTTCATGGCAATGCAGATGCCTTTTCCAAGCGGAAGGTTGATAAGTTTGACACTAGTGATCTAGATTGGACTGATAAAATTCCAGAGTGTCCTGTGTATTCTCCAACGAGAGATGAATTTGAGGATCCTTTGGTGTATTTGCAAAAGATAGCTCCCGAAGCTTCTAAATATGGTATATGCAAGATTATTTCACCTTTGAGTGCTTCTGTTCCTGCTGGGATTGTTTTAATGAAGGAGAAAGCAGGATTCAAGTTTACAACTAGAGTGCAGCCCCTTCGCCTTGCTGAATGGGATACTGAAGACAAAGTTACCTTTTTTATGAGTGGAAGAAATTATACATTTCGTGATTTTGAGAAAATGGCGAACAAGGTTTTTGCACGAAGATATTGCAGCATTGGATGTCTTCCTGCCACATACTTGGAAAAAGAGTTTTGGCAAGAAATAAGTTGTGGAAAGATGGAAACTGTGGAGTATGCATGTGATGTTGATGGCAGTGCATTCTCATCTTCTCCAACTGATCAGTTAGGCCAGAGCAACTGGAATTTGAAGAAACTATCCCGGTTGCCTAAATCAACTTTGCGGCTCCTGGAAACATCAATTCCGGGAGTTACAGAACCCATGTTATACATTGGAATGCTGTTTAGTATGTTTGCTTGGCATGTGGAGGATCATTATTTGTACAGCATTAATTATCAACATTGTGGGGCATCAAAAACATGGTACGGCGTTCCAGGTCATGCAGCTTTGGACTTTGAAAGGGTGGTTAGAGAACATGTGTATACCAATGATATTTTGTCAAGTGACGGGGAGGATGGAGCCTTTGATGTTCTCCTGGGGAAGACAACACTGTTTCCACCAAACATTTTGTTGGAGCATGAAGTTCCTGTCTACAAGGCTGTTCAAAAGCCGGGAGAGTTTGTAATAACCTTCCCTAGGGCATACCATGCTGGCTTCAGTCATGGTTTCAACTGTGGAGAAGCTGTGAATTTTGCAACTAGTGATTGGTTTCCTCTAGGGGCTATTGCTAGCCGCAGATATGCACTTCTTAATAGGATTCCTTTACTGCCCCATGAAGAACTTTTATGCAAAGAAGCAATGTTTCTTTATGCATCCTTGGAGCTTGAAGATTCGGACCTCCCCTCTGCTGACTTGCTTTATCATAATTGCACTAAGGCCTCTTTTGTTAATTTGATACGATTCCAGCATTGTGCTCGTTGGTTCCTAATGAAATCAAGAGCGTGTATAAGTGTCTCTTCTCATTCCCATGGTGCGATTCTCTGTAGCATCTGCAAACGGGACTGCTATGTAGCTTTTGTTGACTGCAACTGTCACTTGCATCCAGTATGCCTACGACATGATATTGAATCTCTTGACTTCACTTGTGGGAGCAAATACACTCTGTTTTTGAGGGAGGAAATCATGGACATGGAAGCTGCAGCCAAGAAGTTTGAGCAGGAAGATGGGATACTTAAGCAAACCCAAAACGACCAAAACATGTATTCATATCCCTTGACAAATATGTTTCAGAAAGCTGAGGCAAATGGATACACACCTTATTGTGAGCTGAAACTTGATTCTGTTGTTGAATTTTATGCAACTCCAGAGCAGACATCAAATAATGAGTGTGGTACACAAAGTCAACATGTTTTTGGACATTGCTTGGAATATATCATACCGGAAGTGTCTCAGGTTTCCTTTACTTCTGCGGCATCCACTCTCTGTTCTCTTTCAGAACCTCTTGAATCCTCCTCTTCTCTGAACAATCTTGAGGGGCATGTCAACTTCAAGCTAGGAAGTACTGATTTTGAGGAGTTTGGTGAAAGAATATCCAACAGTGCACGTGAATCTTCACTATCCCCTGCTCAGTATCAGGAAAGCACGTGTAAACCTCAGGGTGATCTTCACAGATCTGACACAAAGCCCATTGTGGATAACGGGAGTGATGATTCTGATTCAGAGATATTTAGGGTAAAGCGCCCTTCTTCTCTGAAAGCAGAGAGGAGAAATGCGAATGATGTTTTGTCTTTGAAGCATTCTGAGCAGCAGGGACTTAGAAGACTGAAGAAAGTCCTTCCCGAAGGAAGAAGTGAGCAACCAATGGATTTCAGCAGAACCAATGAATCAAGTTACAAACATAGTCACCCCGTTAACCATAAAGTTGATGGTGAGAGGGACAGATTTGCCAGGGGAAACAGCATTCCCATTTCTGTAAGGTATAAGAAGTTTGGCAATGAGGAGATAAGTAGGCAACGAGATCACCACCGGAGAGACAAGGTGCAACAGAACATTAGGGAACCGCCTCCCATTGAGATTGGGCCAAAGCGGCTTAAAGTCCGAGGCCCCTCATTTTTGGGCTTAGAGAGCAGATTGAATTGA 2550 0.4267 MVEGRVRLSKEARNGLEILKRKRLERAKSATVTDKSVANMMNRSGGDALRASASCGVRFHGNADAFSKRKVDKFDTSDLDWTDKIPECPVYSPTRDEFEDPLVYLQKIAPEASKYGICKIISPLSASVPAGIVLMKEKAGFKFTTRVQPLRLAEWDTEDKVTFFMSGRNYTFRDFEKMANKVFARRYCSIGCLPATYLEKEFWQEISCGKMETVEYACDVDGSAFSSSPTDQLGQSNWNLKKLSRLPKSTLRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGVPGHAALDFERVVREHVYTNDILSSDGEDGAFDVLLGKTTLFPPNILLEHEVPVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFATSDWFPLGAIASRRYALLNRIPLLPHEELLCKEAMFLYASLELEDSDLPSADLLYHNCTKASFVNLIRFQHCARWFLMKSRACISVSSHSHGAILCSICKRDCYVAFVDCNCHLHPVCLRHDIESLDFTCGSKYTLFLREEIMDMEAAAKKFEQEDGILKQTQNDQNMYSYPLTNMFQKAEANGYTPYCELKLDSVVEFYATPEQTSNNECGTQSQHVFGHCLEYIIPEVSQVSFTSAASTLCSLSEPLESSSSLNNLEGHVNFKLGSTDFEEFGERISNSARESSLSPAQYQESTCKPQGDLHRSDTKPIVDNGSDDSDSEIFRVKRPSSLKAERRNANDVLSLKHSEQQGLRRLKKVLPEGRSEQPMDFSRTNESSYKHSHPVNHKVDGERDRFARGNSIPISVRYKKFGNEEISRQRDHHRRDKVQQNIREPPPIEIGPKRLKVRGPSFLGLESRLN* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0174 849 Pfam JmjC domain, hydroxylase 265 388 IPR003347 -
Dod02g0174 849 ProSiteProfiles JmjC domain profile. 235 405 IPR003347 -
Dod02g0174 849 SUPERFAMILY Clavaminate synthase-like 166 421 - -
Dod02g0174 849 MobiDBLite consensus disorder prediction 802 849 - -
Dod02g0174 849 Coils Coil 524 544 - -
Dod02g0174 849 SMART cupin_9 232 405 IPR003347 -
Dod02g0174 849 MobiDBLite consensus disorder prediction 689 753 - -
Dod02g0174 849 SMART JmjN_1 87 128 IPR003349 -
Dod02g0174 849 MobiDBLite consensus disorder prediction 669 688 - -
Dod02g0174 849 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN 49 845 - -
Dod02g0174 849 PANTHER LYSINE-SPECIFIC DEMETHYLASE 49 845 - -
Dod02g0174 849 MobiDBLite consensus disorder prediction 667 776 - -
Dod02g0174 849 ProSiteProfiles JmjN domain profile. 88 129 IPR003349 -
Dod02g0174 849 Pfam C5HC2 zinc finger 485 536 IPR004198 -
Dod02g0174 849 Pfam jmjN domain 89 121 IPR003349 -
Dod02g0174 849 Gene3D Cupin 88 441 - -
Dod02g0174 849 MobiDBLite consensus disorder prediction 802 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0174 Dod-Chr2 2452052 2460216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0174 85 549 JUMONJI Transcription Factor Family AT2G34880 33.272 5.26e-65 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Dod02g0174 JmjC 7.7e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0174 - - gmx:100798611 1401.73