Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0173 ATGTATGGGGATTGCCAAGTCATGTCAACCATGGGAGGGAACGTAGTAGTAAACTCAGATACCCTCTTCTCCTCCTCCATCCAGAACTCTAACTTCAGCTTCATGCCCACCATGCCTTTTCATCAGTCTTTTCCTCCCTTGAAAGAAGAAGATGGGATCTTGAGATCAGGGAAGGAAGAGATCATGGAGAGTGGGTCTGGCAGTGAGCAAGTTGAAGACAAGTCCGGGAATGAGCAAGAGAGTGAACAGCCTCAGAATAAGAAGAAGCGTTACCACAGGCACACTGCTCGCCAGATCCAAGAAATGGAAAGTTTGTTCAAGGAATGTCCACACCCGGATGACAAGCAGAGGCTGAAACTGAGCCATGAATTAGGCCTAAAACCACGCCAGGTCAAGTTCTGGTTTCAGAATCGCCGAACCCAGATGAAGGCACAACAAGATCGGGCAGATAATGTGATACTTAGAGCGGAGAATGAGACTCTAAAGAATGAGAACTATCGGCTACAAGCAGCGCTGCGTAATGTTATCTGTCCCAATTGTGGCGGTCCTGGCATAATGGGCGCTGATCTGGGCTTGGATGAACAGCAGCTTCGCCTTGAAAATGCCCGCTTAAGAGAAGAGTTAGAACGAGTTTGTTGTCTGACTTCAAGATACACTGGGCGTCCAATCCAAACAATGGCACCTGCACCTGCCCTTATGCCCCCTTCATTGGACTTGGACATGAACATTTACTCAAGGCACTTCTCAGACCCCAATATTGCCCCTTGCACTGAGATGATTCCAGTGCCAATGCTGCCACCTGAAGCTTCACCATTCCCAGAGGGTGGTCTCTTAATGGAAGAAGAGAAGTCCCTGGCCTTGGAGCTTGCCGCTTCTTCCATGTCCGAGCTGGTGAAGATGTGTCATGCAAACGAGCCACTTTGGATCCGAAGCTGCGAGAACGAAAGGGAAGTGCTTAACTTAGAGGAGCACGCGAGGATGTTCCCATGGCCCTTGAATCTCAAGCACCGAAGTGAGCTTAGGACAGAAGCTAGCCGTGACACTGCTGTGGTCATAATGAATAGTGTCACTCTTGTTGATGCCTACCTAGATGCTCACAAGTGGATGGAATTGTTTCCAACAATCGTTTCTAGAGCAAAAAATGTACAAATTATATCTTCTGGTGCTTCTGGTCATGCAAGCGGGTCTCTTCAGCTGATGTATGCGGAATTTCAAGTTCTTTCTCCTTTGGTATCTACACGTGAGGCACATTTCCTTCGGTATTGCCAACAAAATGCTGAGGAGGGAACCTGGGCCATTGTTGATTTCCCCATTGATAGCTTTCACCAAAATTTCCACCCTTCTTATCCAAGATACTGCAGGCGACCATCTGGCTGTGTGATTCAAGATATGCCAAATGGGTATTCAAGGGTAACGTGGGTTGAGCATGCAGAAGTAGAAGAGAAACCAGTCCATCAGATATTCAGTAACTATGTGTACAGTGGAATGGCATTTGGAGCACAGCGCTGGCTAGGAGTTTTGCAGAGACAATGTGAGAGGGTCGCCAGCCTCATGGCCAGAAACATATCAGATCTTGGAGTGATACCGACACCAGAGGCGCGGAAGAACTTGATGAAACTAGCCCAAAGAATGATAAGAACATTTAGCCTTAACATGAGCACCGCCAGTGGTCAATCATGGACAGCCATATCAGATTCCCCTGAAGACACAGTTAGAATCACAACTAGGAAGATCACTGAGCCAGGCCAACCCAATGGGGTGATTCTTGGTGCCGTTACAACCACTTGGCTGCCCTATCCTCACACCAAGGTCTTTAATCTCCTCAGGGATGAACGCCACAGATCTCAGATGGATGCTCTTTCTAATGGGAACTCACTAAATGAAGTTGCTCATATTGCAAATGGCTCACATCCAGGAAACTGCATTTCCCTTCTCCGCATAAATGTAGCCAGCAACTCATCCCAAAACGTAGAGCTAATGCTGCAAGAGAGCTGCACGGATCAGTCAGGTAGCTTGGTAGTGTACACCACCATCGATGTGGACTCCATCCAGCTAGCCATGAGCGGAGAGGACCCTTCCTGCATTGCCCTTCTCCCCCAGGGCTTCATGATAGTGCCAATGGTATCACCCAACAACAACATTAATGCTGCAGATAGTCGAAATTCATCTGAAGCACCACAAGCTGCTGCTGCTACTGCTGCTGCCGCCACTACTGCTGCTGCTGCCAATTCAGGTTGCCTTCTCACTGTTGGGCTGCAAATTCTTGCAAGCACAATCCCTTCTGCTAAGCTCAACCTTTCAAGCGTGACAGCAATCAACAACCACCTCTGCAACACGCTGCACCAGGTTGAAGCTGCTCTTTGCTGCAGCACCACCACCACTACCAATAGCTGCAGCCATAATGAGAACAATGGAAGTGCTTTTGCTGGGTCTTGCACTGAACCCACCTCTAGTGCACCCCTCAAGCAGTGA 2472 0.4854 MYGDCQVMSTMGGNVVVNSDTLFSSSIQNSNFSFMPTMPFHQSFPPLKEEDGILRSGKEEIMESGSGSEQVEDKSGNEQESEQPQNKKKRYHRHTARQIQEMESLFKECPHPDDKQRLKLSHELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENETLKNENYRLQAALRNVICPNCGGPGIMGADLGLDEQQLRLENARLREELERVCCLTSRYTGRPIQTMAPAPALMPPSLDLDMNIYSRHFSDPNIAPCTEMIPVPMLPPEASPFPEGGLLMEEEKSLALELAASSMSELVKMCHANEPLWIRSCENEREVLNLEEHARMFPWPLNLKHRSELRTEASRDTAVVIMNSVTLVDAYLDAHKWMELFPTIVSRAKNVQIISSGASGHASGSLQLMYAEFQVLSPLVSTREAHFLRYCQQNAEEGTWAIVDFPIDSFHQNFHPSYPRYCRRPSGCVIQDMPNGYSRVTWVEHAEVEEKPVHQIFSNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPTPEARKNLMKLAQRMIRTFSLNMSTASGQSWTAISDSPEDTVRITTRKITEPGQPNGVILGAVTTTWLPYPHTKVFNLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQSGSLVVYTTIDVDSIQLAMSGEDPSCIALLPQGFMIVPMVSPNNNINAADSRNSSEAPQAAAATAAAATTAAAANSGCLLTVGLQILASTIPSAKLNLSSVTAINNHLCNTLHQVEAALCCSTTTTTNSCSHNENNGSAFAGSCTEPTSSAPLKQ* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0173 823 SMART HOX_1 86 149 IPR001356 GO:0003677
Dod02g0173 823 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
Dod02g0173 823 MobiDBLite consensus disorder prediction 61 95 - -
Dod02g0173 823 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Dod02g0173 823 SUPERFAMILY Homeodomain-like 74 146 IPR009057 -
Dod02g0173 823 MobiDBLite consensus disorder prediction 73 87 - -
Dod02g0173 823 CDD START_ArGLABRA2_like 283 512 - -
Dod02g0173 823 SUPERFAMILY Bet v1-like 530 784 - -
Dod02g0173 823 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 78 794 IPR042160 -
Dod02g0173 823 PANTHER - 78 794 - -
Dod02g0173 823 Coils Coil 144 164 - -
Dod02g0173 823 Pfam Homeodomain 88 143 IPR001356 GO:0003677
Dod02g0173 823 SUPERFAMILY Bet v1-like 280 515 - -
Dod02g0173 823 Pfam START domain 289 513 IPR002913 GO:0008289
Dod02g0173 823 Gene3D - 72 156 - -
Dod02g0173 823 CDD homeodomain 88 146 IPR001356 GO:0003677
Dod02g0173 823 SMART START_1 288 513 IPR002913 GO:0008289
Dod02g0173 823 Gene3D - 335 502 IPR023393 -
Dod02g0173 823 ProSiteProfiles START domain profile. 279 516 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0173 Dod-Chr2 2429027 2435738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0173 8 792 Homeobox Transcription Factor Family AT5G46880 57.092 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod02g0173 START 1.5e-40 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0173 - - gmx:100812829 1316.98