Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0168 ATGAGTTTTCAGGACATCGAGGCTGGCCGGCCGTTCGGTTCACGGCGGGGCCTCGTGAACGGGAAACAGGACCCGACGCAGGCGGTGGCTGCCGGAATATTCCAGATCAACACCGCCGTCTCCACCTTCCAGAGGCTCGTCAACACCCTCGGAACCCCCAAAGACACCCCTGAGCTCCGCGAAAAGCTGCACAAGACAAGGGTGCACATTGGGCAATTGGTGAAGGACACTTCAGCGAAACTTAAGCAAGCTAGTGAAATTGATCACCAATCTAATGTTAATGCAAACAAGAAGATAGCAGATGCTAAATTAGCGAAAGATTTTCAGGCAGTGTTGAAAGAATTTCAGAAGGCACAGCGTCTTGCAGCTGAGAGGGAAACAGCTTACACGCCATTTGTTCCGCAAGCAGTTCTTCCATCCAGCTATACAGCTAGTGAAGTTGATGCTAGTTCTGACAGGACTCCAGAACAGCATGCCCTTCTAGCACAATCGAGAAGGCAGGAGGTATTGTTTTTAGATAATGAGATTGCCTTCAATGAGGCTATTATTGAGGAAAGAGAGCAAGGCATTCAGGAAATTCAGCAGCAAATTGGCGAAGTAAATGAAATTTTCAAAGATCTTGCTGTGCTTGTGCATGAACAAGGAGCCATGATTGGTAACTTAGTTTGTCATTTTTCTTGGTTTTTGCTAATTAAAGACATCCTTGTATTAATCCATGTTTTTCTTTGTCTTGGACTTCTCATGTTATCTGATGCCTATAATTTCTATTTTCTAGATGATATCGGGTCGAACATCGAGCATTCCCATGAAGCAACTGTACAAGCAAGATCTCAACTTGCAAAAGCTTCAAAGACCCAGAGATCAAATTCGTCTTTGGTAATATATAATTTATAA 894 0.4418 MSFQDIEAGRPFGSRRGLVNGKQDPTQAVAAGIFQINTAVSTFQRLVNTLGTPKDTPELREKLHKTRVHIGQLVKDTSAKLKQASEIDHQSNVNANKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTASEVDASSDRTPEQHALLAQSRRQEVLFLDNEIAFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGAMIGNLVCHFSWFLLIKDILVLIHVFLCLGLLMLSDAYNFYFLDDIGSNIEHSHEATVQARSQLAKASKTQRSNSSLVIYNL* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0168 297 Gene3D - 181 225 - -
Dod02g0168 297 PANTHER SYNTAXIN OF PLANTS PROTEIN 2 221 - -
Dod02g0168 297 PANTHER SYNTAXIN OF PLANTS PROTEIN 257 294 - -
Dod02g0168 297 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 180 221 IPR000727 -
Dod02g0168 297 SMART SynN_4 13 127 IPR006011 GO:0016020
Dod02g0168 297 MobiDBLite consensus disorder prediction 1 21 - -
Dod02g0168 297 PANTHER SYNTAXIN 2 221 IPR045242 -
Dod02g0168 297 PANTHER SYNTAXIN 257 294 IPR045242 -
Dod02g0168 297 CDD SynN 23 149 IPR006011 GO:0016020
Dod02g0168 297 SMART tSNARE_6 175 241 IPR000727 -
Dod02g0168 297 Pfam SNARE domain 258 294 IPR000727 -
Dod02g0168 297 Pfam Syntaxin-like protein 30 129 IPR006011 GO:0016020
Dod02g0168 297 Gene3D - 20 133 - -
Dod02g0168 297 SUPERFAMILY t-snare proteins 22 215 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0168 Dod-Chr2 2387005 2390631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0168 1 293 SNARE and Associated Proteins AT5G46860 65.529 1.17e-129 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0168 - K08488 gsj:114391232 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0168 02 2387005 2390631 Dod02g0168 02 2387005 2390631 ECH