Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0166 ATGGACGGCGGAGTGAGTACCAGCAGCGGAGACGGCGGTACCGGCTCAAACGGCGCCACGCCGGCGCCGGCGCCGATGCCGAACGTGAACGCGCCGCCGCCGTTCCTGAGCAAGACGTACGACATGGTGGATGACCCGTCGACGGACGCGATAGTGTCGTGGAGCGCGACGAACAACAGCTTCGTGGTTTGGAACCCGCCGGAATTCGCGAGAGACCTTCTGCCCAAATACTTCAAGCACAACAACTTCTCCAGCTTCGTTAGGCAGTTAAACACTTACGGTTTCAGGAAGGTAGATCCCGATCGCTGGGAGTTTGCAAATGAGGGCTTTTTGAGGGGTCAAAAGCATTTGTTGAAGAGTATAACTCGGCGAAAACCTGCCCATGGTCATAGTCATCAACAGGCTCAGCAATCACATGGACAGAGTTCATCAGTTGGGGCATGTGTAGAAGTTGGGAATTTTGGGCTTGAGGAAGAGGTTGAGAGACTTAAAAGAGATAAGAATGTGCTCATGCAAGAGCTTGTGAGGTTGAGGCAGCAGCAACAGGCCACTGATACCCAGATGCAGACTGTGGTTCAGCGTCTTCATGGAATGGAACAACGGCAGCAGCAAATGATGTCATTTCTTGCTAAAGCTGTCCAGAGCCCTGGCTTCTTTGCTCAGTTTGTACAACAGCAAAATGAGAACAATAGGCGCATCACTGAAGTCAACAAAAAGCGTCGCCTCAAGCAGGAAGGTATTTCTGAAACTGGCTGCACTGCTGCTCTGGATGGACAAATTGTTAAATATCAACCTCCAATGAATGATGCCGCAAAAACCATGCTAAGGCAGTTCAAGAAATGGGATCCTTCCTGTTTAGAGGGTTTAAGTGAAAACCCTGATACTTACTTGATTGGTGATGGTTCATCATCAACATCTAGTGCGATGGACTGCAGCAGCTCTCCGAGCTGGAATTCTGGAGTAACACTTCAAGAGGTCCCTCCAGCTTCATTGCAGTGTTCCCACACTCCAGCTGCAACAGGGACTCAAGGGCACGCCCCCTCAGCAGGCAAACATGAGATTCTGCCTTTACCACAAGCTGCAGCTCTTGAAAAAGTTACAAAGGATGGAGCACTTGTGGCACCTTCTATCCATGTTCCTCAATCAGATGTCATCATGCCTGATCTTTCAGCAATAAATGAGATGGAGACTGCAGGTATTCTTGATATTCCTGAAGAAAATTATATGGGAACAGAGACAGGTGATGAGGGATATATGGATCCTACTTCTTTTGGTATTAGTGGGTCATTTCCCATTGATTTAGAAGGTATTTCAACCGATGCAGACATTGATGATTTGTTAGGCAATCCTTCTTTTTGGGATGATATTTTGCAAACTCCGGTGCCAGAGGATGTTGAGGCAGATGTTGTTGAAAGGTCCAAGGGGAATGGGGTCAAGCTACCAGAAAATGGATGGGACAAAACTCCACATATGGATCATCTTACTGAGCAGATGGGTCTTCTTTCTTCTGACGCGAAAAAAAGAGTTTGA 1530 0.4804 MDGGVSTSSGDGGTGSNGATPAPAPMPNVNAPPPFLSKTYDMVDDPSTDAIVSWSATNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSITRRKPAHGHSHQQAQQSHGQSSSVGACVEVGNFGLEEEVERLKRDKNVLMQELVRLRQQQQATDTQMQTVVQRLHGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNENNRRITEVNKKRRLKQEGISETGCTAALDGQIVKYQPPMNDAAKTMLRQFKKWDPSCLEGLSENPDTYLIGDGSSSTSSAMDCSSSPSWNSGVTLQEVPPASLQCSHTPAATGTQGHAPSAGKHEILPLPQAAALEKVTKDGALVAPSIHVPQSDVIMPDLSAINEMETAGILDIPEENYMGTETGDEGYMDPTSFGISGSFPIDLEGISTDADIDDLLGNPSFWDDILQTPVPEDVEADVVERSKGNGVKLPENGWDKTPHMDHLTEQMGLLSSDAKKRV* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0166 509 Coils Coil 153 180 - -
Dod02g0166 509 Pfam HSF-type DNA-binding 35 124 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0166 509 Gene3D - 28 125 IPR036388 -
Dod02g0166 509 ProSitePatterns HSF-type DNA-binding domain signature. 74 98 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0166 509 SUPERFAMILY "Winged helix" DNA-binding domain 31 124 IPR036390 -
Dod02g0166 509 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 14 494 IPR027725 -
Dod02g0166 509 MobiDBLite consensus disorder prediction 1 16 - -
Dod02g0166 509 PRINTS Heat shock factor (HSF) domain signature 35 58 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0166 509 PRINTS Heat shock factor (HSF) domain signature 73 85 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0166 509 PRINTS Heat shock factor (HSF) domain signature 86 98 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0166 509 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1 14 494 - -
Dod02g0166 509 MobiDBLite consensus disorder prediction 1 33 - -
Dod02g0166 509 MobiDBLite consensus disorder prediction 123 144 - -
Dod02g0166 509 SMART hsfneu3 31 124 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0166 509 MobiDBLite consensus disorder prediction 331 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0166 Dod-Chr2 2365257 2369970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0166 1 502 HSF AT1G32330 52.390 7.87e-167 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod02g0166 HSF_DNA-bind 3e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0166 K09419 - gmx:100815121 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0166 02 2365257 2369970 Dod02g0166 02 2365257 2369970 ECH