Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0165 ATGGATGGAGGAGTGAGTACCAGCGGCGGAGACGGCGGTGGCGGTGGCTCCAACGGCGCCACGCCGACGCCGGCGCCGATGCCGAATGCGAACGCGCCGCCGCCATTCCTGAGCAAGACGTACGACATGGTGGATGACCCGTCGACGGACGCGGTCGTGTCGTGGAGCGCTACGAACAACAGCTTCGTGGTTTGGAACCCACCGGAATTCGCGAGAGACCTTCTCCCCAAATACTTCAAGCACAACAACTTCTCCAGCTTCGTTAGGCAGTTGAACACTTACGGTTTCAGGAAGGTTGATCCAGATCGCTGGGAATTTGCAAATGAGGGCTTTTTGAGGGGCCAAAAGCACATGCTTAAGAGTATAACTCGGCGAAAACCTCCCCATGGTCATAATCATCAACAGGGTCAGCAATCACATGTACAAAATTCATCAGTCGGGGCATGTGTAGAAGTTGGGAAGTTTGGGCTTGAGGAAGAGGTTGAGAGGCTCAAAAGAGATAAGAATGTGCTCATGCAAGAGCTTGTGAGGCTAAAACAGCAGCAACAGGCCACTGATGGCCAGCTGCAGGCAATGGTTCAGCGCCTTCAGGGAATGGAGCAACGACAGCAACAAATGATGTCATTCCTAGCTAAAGCTGTCCAGAGCCCTGGCTTCTTTGCTCAGTTTGTACAACAGCAAAATGAGAATAATAGGCGCATAACTGAAGTCAACAAAAAGCGTCGACTCAAGCAGGAAGATATTGCTGAAACTGAGAATCCTGCTGCTCCTGATGGACAAATCATTAGATATCAACCTCTGTTAAAGGATGCAGCAAAAGCAATGCTAAGGCAGATCATGAAATGGGATACTTCTCGTGTAGAATCTTTTGGTAAAAACGCTGATAGTTACTTGATTGGTGATGATTCATCATCATCATCCGGTGCAATGGACACCAGCTCTTCAAGCTGGACTACTGGAGTAACACTTCAAGAGGTTCCTCCAGCATCAGTACAGTCCTCTCACATTCCAGCTGCACCGGTGACTCAAGGACATGTCGCCTCAGCTGGCAGACCTGAAATTCAATCTTTATCACAAGCTGCAGGTCCTGAAAAAGTTGCAAAGGATGGAGCACATGAGGTACCTTCTATCCCCATTCCTCAAGCAGGTGTCATTATGCCTGATCTTACGCCAATAAATGAGATGGAGACTGGAAGTATTCTTGGTATTCCTGAAGAAAATTATTTGGCACCCGAGTCGGGTGATGAGGGATTTATGGATCCTACTTCGTTAGGAGTTAGTGGGTCATTTCCCATTGATTTTGAAGGTATTTCACCCAATGCGGACATTGATGATTTGTTGGGCAATCCTTCCTTTTGGGATGATCTTTTGCGAACTCCAGTGCAAGAAGATACTGAAACTAGTGTTGCTGAAGTGTCCAAAGGGAATGAGGTGCAACCAGCGGAAAATGGATGGGAGAAAACTCAACATATGGATCAACTCACAGAGCAGATGGGTCATCTTTCTTCTGATGCAAAATAA 1521 0.4786 MDGGVSTSGGDGGGGGSNGATPTPAPMPNANAPPPFLSKTYDMVDDPSTDAVVSWSATNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHMLKSITRRKPPHGHNHQQGQQSHVQNSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLKQQQQATDGQLQAMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNENNRRITEVNKKRRLKQEDIAETENPAAPDGQIIRYQPLLKDAAKAMLRQIMKWDTSRVESFGKNADSYLIGDDSSSSSGAMDTSSSSWTTGVTLQEVPPASVQSSHIPAAPVTQGHVASAGRPEIQSLSQAAGPEKVAKDGAHEVPSIPIPQAGVIMPDLTPINEMETGSILGIPEENYLAPESGDEGFMDPTSLGVSGSFPIDFEGISPNADIDDLLGNPSFWDDLLRTPVQEDTETSVAEVSKGNEVQPAENGWEKTQHMDQLTEQMGHLSSDAK* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0165 506 MobiDBLite consensus disorder prediction 1 35 - -
Dod02g0165 506 PRINTS Heat shock factor (HSF) domain signature 36 59 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0165 506 PRINTS Heat shock factor (HSF) domain signature 87 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0165 506 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0165 506 SUPERFAMILY "Winged helix" DNA-binding domain 31 125 IPR036390 -
Dod02g0165 506 Coils Coil 154 181 - -
Dod02g0165 506 MobiDBLite consensus disorder prediction 124 143 - -
Dod02g0165 506 Pfam HSF-type DNA-binding 36 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0165 506 MobiDBLite consensus disorder prediction 482 506 - -
Dod02g0165 506 SMART hsfneu3 32 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0165 506 Gene3D - 29 126 IPR036388 -
Dod02g0165 506 MobiDBLite consensus disorder prediction 298 318 - -
Dod02g0165 506 ProSitePatterns HSF-type DNA-binding domain signature. 75 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod02g0165 506 MobiDBLite consensus disorder prediction 463 506 - -
Dod02g0165 506 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 10 493 IPR027725 -
Dod02g0165 506 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1 10 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0165 Dod-Chr2 2359292 2363493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0165 5 502 HSF AT1G32330 52.539 4.78e-165 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod02g0165 HSF_DNA-bind 7.7e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0165 K09419 - gmx:100815121 726.472