Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod02g0156 | ATGTCAACGAGAAAGACGAGAGGGAGAGACCACCGCGCACCTCAGAAGGACAAGGACAAGGACAAGGACGACGAGTCCTTCACCGTAAAGCCTCTCCATCAGCAACCACCGCCACCGTCCACTTCTCGAAACCACCACCACCACCGCACACCAAGGTCGACCAACACCCGCGCCGCCCAACATCATCAACAACAAACCAAATTCCGCTTCGTCAAGAAGTCTGAGCTCCCTCCCTCTTCTCCTTCTTCTGATTCCATTATTTCCAACTCCGATTCCATGGCGGCGGCTGGTTCTGCTGATCATGCCACACCGCCACCGCCGCCGCCACATGAGAATCACCGCCAAGAAGAACAGAACGACCACGCTGTTTGTGATGCTGTAAAAGTGACAGATCACGGGGATAGTTCGAGCAAGATCAAGGAAGAAGAAGAGGATGGTGATGATGTTGTGGTTAGGCTTGACAGGTTGCTCAGTGGTTTGGAAGAGCCTGAGTTGTCTGAGGAGAAGCTCAGAATCAATGACCAATTGCAGCAAGATGAGTTACTTGTGGTGGAGTCAATTTATGGAGAAAATGTTCTCAAGCTTGACACTTGCAAAGGCCTCCGCTGTTTTCAGATACAAATACACATTGAAGTTTTGGATGGAATTGCCATTACTGCTAATCTGAACTCTTCTAATGAACTTGAGACTGTAAGCAGCAATTCCGATGACTTCTTATACTCCTTCAATGTCCAATATCTTCCACCGATTGTTTTGACATGTTTATTGCCCAAGTTATACCCAAGCCACCTGCCACCTATCTTTACAATCTCTGTTCGGTGGTTGGAATCCTTAGAGATTTTAAGTCTATGCTCCCAATTGGATTCGATATGGGCAAAGCAGCAAGGGATGGAAGTAATCTACCAATGGGTAGAATGGTTGCATGGTTCTTCGCTTTCCCATCTTGGGTTTGATAAGGAAATTACCCTTGGGCATAGTGGCATGAATCATGTTGGAGATGAGCATGTCTTTTCAGGAACAGTGTCCCTGGATGTTGTTATTCCTTTTTTGCAGAGTTACAACAATGAGAGACACAATGAAAACTTCCTCAAAGAATTGCATGAGTGTTGTATTTGCTATAGTGAATATGCAGGTACTGAGTTTGTCTCGTTACCATGCAAGCATTTTTTTTGCTTGAAATGCTTGCAGACCTTTACTCAGATGCATGTAAAAGAAGGCACCATTAGTTATCTTCAGTGTCCTGATTCAAAGTGTACGGTTATGATTCCACCTGGTCTTTTAAAACACTTTCTTGGTGACAAAGAGTATGAACGCTGGGAATCTATGATGCTGGAGAGAACACTTGCGTCGATGTCTGATGTTGTTTATTGCCCAAGGTGTGAAACACCTTGTATAGAGGATGAAGACCAACATGCTCAATGCTCAAAATGCTTTTTTAGCTTTTGTACCCTTTGTAAGGAACGACGCCATGTTGGCGTAGAATGCATGACAATAGATATGAAGCTTCAAATTTTGCAGGACCGTCAAAATTCGTCTAACTTAAAGGAAGATCAAAAGCAAAGGGAACGTGAAAAGATCAATGAAATGCTCAGTATGAAAGAAATTCATCGTGATTCCAAGCTGTGCCCTTCTTGTGACATGGCAATTAATCGCATTGAAGGTTGTAACAAAATGAAGTGCGGTAATTGCGGAGAATATTTTTGTTACCGCTGCAACAAGGGCACTTGA | 1728 | 0.441 | MSTRKTRGRDHRAPQKDKDKDKDDESFTVKPLHQQPPPPSTSRNHHHHRTPRSTNTRAAQHHQQQTKFRFVKKSELPPSSPSSDSIISNSDSMAAAGSADHATPPPPPPHENHRQEEQNDHAVCDAVKVTDHGDSSSKIKEEEEDGDDVVVRLDRLLSGLEEPELSEEKLRINDQLQQDELLVVESIYGENVLKLDTCKGLRCFQIQIHIEVLDGIAITANLNSSNELETVSSNSDDFLYSFNVQYLPPIVLTCLLPKLYPSHLPPIFTISVRWLESLEILSLCSQLDSIWAKQQGMEVIYQWVEWLHGSSLSHLGFDKEITLGHSGMNHVGDEHVFSGTVSLDVVIPFLQSYNNERHNENFLKELHECCICYSEYAGTEFVSLPCKHFFCLKCLQTFTQMHVKEGTISYLQCPDSKCTVMIPPGLLKHFLGDKEYERWESMMLERTLASMSDVVYCPRCETPCIEDEDQHAQCSKCFFSFCTLCKERRHVGVECMTIDMKLQILQDRQNSSNLKEDQKQREREKINEMLSMKEIHRDSKLCPSCDMAINRIEGCNKMKCGNCGEYFCYRCNKGT* | 576 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod02g0156 | 575 | PANTHER | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 155 | 573 | IPR031127 | GO:0004842|GO:0016567 | |
Dod02g0156 | 575 | PANTHER | RBR-TYPE E3 UBIQUITIN TRANSFERASE | 155 | 573 | - | - | |
Dod02g0156 | 575 | SUPERFAMILY | RING/U-box | 528 | 573 | - | - | |
Dod02g0156 | 575 | SMART | RWD2001b | 179 | 314 | IPR006575 | GO:0005515 | |
Dod02g0156 | 575 | MobiDBLite | consensus disorder prediction | 6 | 29 | - | - | |
Dod02g0156 | 575 | ProSiteProfiles | TRIAD supradomain profile. | 365 | 575 | IPR044066 | - | |
Dod02g0156 | 575 | MobiDBLite | consensus disorder prediction | 1 | 119 | - | - | |
Dod02g0156 | 575 | Pfam | RWD domain | 175 | 308 | IPR006575 | GO:0005515 | |
Dod02g0156 | 575 | ProSiteProfiles | RWD domain profile. | 179 | 314 | IPR006575 | GO:0005515 | |
Dod02g0156 | 575 | SMART | ibrneu5 | 524 | 573 | IPR002867 | - | |
Dod02g0156 | 575 | SMART | ibrneu5 | 437 | 495 | IPR002867 | - | |
Dod02g0156 | 575 | Gene3D | Ubiquitin Conjugating Enzyme | 166 | 315 | IPR016135 | - | |
Dod02g0156 | 575 | SUPERFAMILY | UBC-like | 173 | 308 | IPR016135 | - | |
Dod02g0156 | 575 | SUPERFAMILY | RING/U-box | 437 | 500 | - | - | |
Dod02g0156 | 575 | Pfam | IBR domain, a half RING-finger domain | 437 | 495 | IPR002867 | - | |
Dod02g0156 | 575 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 364 | 452 | IPR013083 | - | |
Dod02g0156 | 575 | SUPERFAMILY | RING/U-box | 364 | 449 | - | - | |
Dod02g0156 | 575 | ProSiteProfiles | Zinc finger RING-type profile. | 369 | 417 | IPR001841 | - | |
Dod02g0156 | 575 | MobiDBLite | consensus disorder prediction | 76 | 96 | - | - | |
Dod02g0156 | 575 | ProSitePatterns | Zinc finger RING-type signature. | 386 | 395 | IPR017907 | - | |
Dod02g0156 | 575 | SMART | ring_2 | 369 | 416 | IPR001841 | - | |
Dod02g0156 | 575 | SMART | ring_2 | 457 | 545 | IPR001841 | - | |
Dod02g0156 | 575 | Gene3D | - | 514 | 574 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod02g0156 | 368 | 573 | C3H Transcription Factor Family | AT2G31760 | 24.057 | 2.71e-14 | 73.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod02g0156 | K11971 | - | gmx:100500662 | 704.901 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod02g0156 | 02 | 2277777 | 2281352 | Dod02g0156 | 02 | 2277777 | 2281352 | ECH |