Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0154 ATGTCAGGCCGGGGTGTATTCTCCGGTGACTCGGCCATGGTGGATGCTAAGGAAAATGACAGGAAGAAGAAGGAGCACAAGGTTCCTTTTATGAAGCTGTTCTCCTTTGCTGACTCTTATGATTGTGTCTTAATGGCCGTTGGATCTGTTGGGGCATGTGTCCATGGTGCCTCCGTTCCTGTTTTCTTCATCTTCTTTGGCAAGTTGATCAATGTCATAGGCTTGGCTTATCTTTTCCCCAAGGAAGCTTCTCACCAAGTTGCCAAGTACTCCTTGGATTTTGTGTATCTAAGTATAGCAATACTGTTTTCATCTTGGACAGAGGTGGCTTGTTGGATGCATACTGGGGAACGCCAAGCAGCAAAGATGAGATTGGCTTATTTAAGGTCAATGTTGAACCAAGACATTAGCCTATTTGATACGGAGGCGTCAACAGGAGAGGTCATTTCTGCCATTACAAGTGACATTATCATTGTTCAAGATGCATTGTCCGAGAAGGTAGGGAACTTCATGCACTACATAAGCCGATTTCTTGCTGGCTTTACTATTGGCTTTGTCAGAGTGTGGCAGATCAGTCTAGTGACACTTTCAATAGTCCCCTTTATTGCACTTGCTGGAGGACTTTATGCATACGTGACAATTGGACTTATTGCTAAAATTCGAAAAGCCTACGTGAGGGCCGGTGAAATTGCTGAAGAGGTGATAGGGAATGTTAGAACGGTTCAAGCATTTGCAGGAGAAGAAAGAGCAGTGAAATCATACAAAGCGGCTCTGATGAAGACTTACAAGAACGGTCGAAGAGCAGGTCTAGCAAAGGGTCTGGGGCTAGGCTCAATGCATTGTGTCCTTTTTCTGTCGTGGGCTTTGCTTGTTTGGTTCACCAGCGTTGTTGTTCACAAGAATATTGCCAACGGGGGCGAGTCTTTCACTACCATGCTCAATGTTGTCATCTCTGGCCTGTCGCTTGGCCAGGCTGCACCTGATATCTCTGCATTTATCCGAGCAAAGGCTGCAGCTTATCCCATTTTTGAGATGATAGAGAGGGACACAGTGAGCAAAAGCAGCTCGAAGACTGGTCGCAGATTAAGCAAATTGGAGGGTCAGATCCAATTCAAGGATGTCTGTTTTAGTTATCCATCTCGTCCGGATGTAGTTGTCTTCAACAACCTCTGTCTTGAGATCCCTTCAGGGAAAATTGTGGCCCTTGTGGGAGGAAGTGGTTCTGGAAAGAGCACTGTTATATCGCTGATCGAACGCTTCTATGAGCCGCTTTCTGGCCAGATATTACTAGATAGGAATGATATCAGGGAACTTGATCTCAAATGGCTTAGGAAGCAGATTGGGCTAGTTAATCAAGAACCTGCACTCTTTGCTACAAGCATCAAGGAGAACATACTATATGGAAAAAATGATGCCACTCTTGAAGAACTGAAATGTGCGGTGAAGCTTTCAGATGCTCAGTCTTTCATTAACAATCTTCCTGATAGATTAGAAACTCAGGTTGGTGAGAGGGGGATACAACTATCAGGTGGACAAAAGCAAAGAATTGCAATATCTCGTGCTATAGTGAAGAATCCGTCAATCCTTCTGTTGGATGAAGCAACCAGTGCTTTGGATTCTGAGTCCGAGAAGAGTGTACAAGAGGCTCTTGATCGTGTCATGGTTGGCAGAACAACTGTGATAGTGGCACACAGACTTTCTACCATTAGGAATGCAGATGTGATTGCTGTTGTTCAGGGAGGGAAGATTGTGGAAACTGGCAACCATGAGGAACTAATGTCCAACCCAACTAGTGTATATGCATCTCTTGTTCAACTCCAGGAGGCAAACTCTCTGCAACGCCTCCCCTCGGTTGGTCCTAGCTTGGGACGGCAATCAAGCATAAAGTACTCAAGGGAATTATCCCGTAGAACAACAAGCTTCGGCAGTAGTTTTCGATCAGATAAAGATTCTATTGGCCGGGCTTGTACTGATGAAGGGGAGAATGCAAGCAAGTCAAAGCATGTTTCAGCAAGAAGACTGTATTCTATGGTTGGTCCTGACTGGTTTTATGGGGTTTTTGGGACCTTCTGTGCATTTATTGCTGGAGCACAGATGCCACTCTTTGCTCTTGGCATCTCTCACGCTCTTGTATCGTACTATATGGATTGGGATACAACACGTCATGAAGTTAAAAAAATTGCTTTCCTCTTCTGTGGAGCAGCAGTTATAACTATCATTGTCCATGCCGTTGAACATCTTTCTTTTGGAATTATGGGGGAGCGACTTACCCTTCGTGTGAGAGAAATGATGTTTTCAGCTATTTTGAAGAATGAAATTGGGTGGTTTGATGATACAAACAACACAAGTTCCATGCTTTCATCGCGTTTGGAGAGTGATGCAACTTTATTACGGACTATAGTTGTTGATCGATCTACAATTCTCTTACAGAATGTTGGCCTGGTTGTTGCTTCATTTATTATTGCCTTCATGTTGAACTGGAGAATAACGCTTGTCGTCTTGGCCACATATCCTTTGATCATTTGTGGTCATATTAGTGAGAAACTTTTCATGAAAGGCTATGGTGGCAACTTGAGCAAAGCATATCTAAAAGCCAACATGCTGGCTGGGGAGGCCGTGAGCAATATACGCACTGTTGCTGCATTTTGTTCTGAAGAAAAGGTCCTGGACCTCTATGCAAATGAGCTTGTTGATCCTTCCAAAAATTCATTTCGGCGGGGTCAAATAGCTGGCATATTCTATGGCATTTCCCAGTTCTTTATTTTCTCATCTTATGGCCTTGCCTTGTGGTATGGATCTGTTTTGATGTACAAGGAGCTTGCAAGCTTTAAATCAGTTATGAAGTCTTTTATGGTTTTAATCGTAACGGCCTTGGCTATGGGGGAGACTTTGGCGCTGGCGCCGGACCTTTTGAAAGGGAATCAAATGGTTGCTTCAGTTTTTGAAGTGATGGATAGAAAGACAGGAATAATAGGTGATGTTGGGGAAGAGTTGAAGACAGTGGAGGGAACAATTGAGCTCAAAAGAATCCATTTCGGCTACCCTTCAAGGCCAGATGTGATTATTTTCAAGGATTTCAATCTACTAGTTCCTTCAGGCAAGAGTATCGCCTTGGTGGGGCAAAGTGGTTCTGGCAAAAGCTCTGTTATTTCCCTCATACTCAGATTTTATGATCCAACATCTGGGAAGGTGATGATTGATGGAAAAGACGTCAGGAGACTTAATCTGAAATCTCTTAGGAAACACATTGGTCTTGTGCAACAAGAACCAGCTCTTTTTGCGACTTCAATTTATGAAAACATTCTGTATGGGAAGGAAGGAGCCTCTGATTCAGAAGTAATTGAAGCAGCCAAGCTTGCGAATGCTCACAACTTCATCAGTGGTCTTCCAGAGGGATACTCCACCAAGGTTGGCGAGCGAGGAGTGCAACTATCTGGTGGCCAGAGACAAAGGGTAGCCATTGCTAGAGCTGTTCTAAAGAACCCTGAAATCTTGCTATTGGATGAAGCCACCAGTGCACTGGATGTGGAATCTGAGCGTGTTGTGCAGCAAGCCTTGGACAGATTAATGCAGAACAGAACAACAGTTATTGTGGCACATAGGCTATCTACAATAAGAAATGCAGACCAAATCTCAGTTTTGCAGGATGGGAAGATAATTGAGCAAGGGACTCATTCAAGTCTTATAGAAAATAAAAATGGACCATACTTTAAATTAGTCAACCTTCAACAGCAACAGCATCAACAATAG 3750 0.4371 MSGRGVFSGDSAMVDAKENDRKKKEHKVPFMKLFSFADSYDCVLMAVGSVGACVHGASVPVFFIFFGKLINVIGLAYLFPKEASHQVAKYSLDFVYLSIAILFSSWTEVACWMHTGERQAAKMRLAYLRSMLNQDISLFDTEASTGEVISAITSDIIIVQDALSEKVGNFMHYISRFLAGFTIGFVRVWQISLVTLSIVPFIALAGGLYAYVTIGLIAKIRKAYVRAGEIAEEVIGNVRTVQAFAGEERAVKSYKAALMKTYKNGRRAGLAKGLGLGSMHCVLFLSWALLVWFTSVVVHKNIANGGESFTTMLNVVISGLSLGQAAPDISAFIRAKAAAYPIFEMIERDTVSKSSSKTGRRLSKLEGQIQFKDVCFSYPSRPDVVVFNNLCLEIPSGKIVALVGGSGSGKSTVISLIERFYEPLSGQILLDRNDIRELDLKWLRKQIGLVNQEPALFATSIKENILYGKNDATLEELKCAVKLSDAQSFINNLPDRLETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDSESEKSVQEALDRVMVGRTTVIVAHRLSTIRNADVIAVVQGGKIVETGNHEELMSNPTSVYASLVQLQEANSLQRLPSVGPSLGRQSSIKYSRELSRRTTSFGSSFRSDKDSIGRACTDEGENASKSKHVSARRLYSMVGPDWFYGVFGTFCAFIAGAQMPLFALGISHALVSYYMDWDTTRHEVKKIAFLFCGAAVITIIVHAVEHLSFGIMGERLTLRVREMMFSAILKNEIGWFDDTNNTSSMLSSRLESDATLLRTIVVDRSTILLQNVGLVVASFIIAFMLNWRITLVVLATYPLIICGHISEKLFMKGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCSEEKVLDLYANELVDPSKNSFRRGQIAGIFYGISQFFIFSSYGLALWYGSVLMYKELASFKSVMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRKTGIIGDVGEELKTVEGTIELKRIHFGYPSRPDVIIFKDFNLLVPSGKSIALVGQSGSGKSSVISLILRFYDPTSGKVMIDGKDVRRLNLKSLRKHIGLVQQEPALFATSIYENILYGKEGASDSEVIEAAKLANAHNFISGLPEGYSTKVGERGVQLSGGQRQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMQNRTTVIVAHRLSTIRNADQISVLQDGKIIEQGTHSSLIENKNGPYFKLVNLQQQQHQQ* 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0154 1249 Pfam ABC transporter 388 536 IPR003439 GO:0005524
Dod02g0154 1249 SUPERFAMILY ABC transporter transmembrane region 33 339 IPR036640 GO:0005524|GO:0016021
Dod02g0154 1249 Gene3D ABC transporter type 1, transmembrane domain 32 610 IPR036640 GO:0005524|GO:0016021
Dod02g0154 1249 CDD ABC_MTABC3_MDL1_MDL2 369 607 - -
Dod02g0154 1249 ProSitePatterns ABC transporters family signature. 1144 1158 IPR017871 GO:0005524
Dod02g0154 1249 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 686 972 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g0154 1249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 999 1243 IPR027417 -
Dod02g0154 1249 CDD ABC_MTABC3_MDL1_MDL2 1005 1242 - -
Dod02g0154 1249 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 21 1245 IPR039421 -
Dod02g0154 1249 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 21 1245 - -
Dod02g0154 1249 Gene3D - 1003 1247 IPR027417 -
Dod02g0154 1249 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 369 605 IPR003439 GO:0005524
Dod02g0154 1249 SUPERFAMILY ABC transporter transmembrane region 667 986 IPR036640 GO:0005524|GO:0016021
Dod02g0154 1249 Pfam ABC transporter 1024 1172 IPR003439 GO:0005524
Dod02g0154 1249 Pfam ABC transporter transmembrane region 687 958 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g0154 1249 Pfam ABC transporter transmembrane region 50 317 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g0154 1249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 361 607 IPR027417 -
Dod02g0154 1249 CDD ABC_6TM_Pgp_ABCB1_D1_like 45 342 - -
Dod02g0154 1249 ProSitePatterns ABC transporters family signature. 508 522 IPR017871 GO:0005524
Dod02g0154 1249 Gene3D ABC transporter type 1, transmembrane domain 807 1002 IPR036640 GO:0005524|GO:0016021
Dod02g0154 1249 Gene3D - 359 608 IPR027417 -
Dod02g0154 1249 CDD ABC_6TM_Pgp_ABCB1_D2_like 675 990 - -
Dod02g0154 1249 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 46 334 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod02g0154 1249 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1005 1241 IPR003439 GO:0005524
Dod02g0154 1249 SMART AAA_5 1032 1224 IPR003593 -
Dod02g0154 1249 SMART AAA_5 396 588 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0154 Dod-Chr2 2245058 2256876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0154 47 629 Calmodulin-binding Proteins AT2G36910 38.917 2.43e-113 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0154 K05658 - gmx:100819045 2208.33