Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0146 ATGTCTTCACCATCCCCTGCAACATACAGCACCCCACCAGCGTTAATAGCCTTCACCCTCACGATTGTCGTCATCTGCTTCATTTGCTTCAGCTTGGTATACTTCTCAAGGTGTTACTTTGTGAGCATAATCCAAACCTGGGCATTCCACCATTCTGCCCCTAGCACCCTTATTCGCCTCTCTCCTTCCAACAACAACGCCTCTTCCTCATCACCCTTTAGAGGCCTCGATCCTTCACTCCTCGAATCATTCCCAACATTCCCTTATTCCTCCGTGAAGGATCTCCGCAAGGAGGAGACGAAGAAGTACAGCCTCGAGTGCGCCATTTGCCTAGTGGAGTTCGAGGATGACAGCATGCTTCGATTGCTCACCGTTTGCCGCCACGTATTCCACCAGGATTGCGTAGACCTATGGCTTCGATCCCATAAAACATGCCCCGTTTGCCGCACGGATCTTGAAACGAGACAGTCTCATCATGATGAGAGTAGTGTTGTTGAGGAAGAGGATTGTGGTGTGGGTGGTGAGGTGTGCATTGATGTGAGGGAAAGTGTAGGAGAAGGAAGAGAAGAAAGGTTTTCACGGTCACACTCGACGGGGCACTCCATAGTTATGGTTAGGGGAGGAGGGGATGGGTTAGGAGGAGATGGTGATGATGATAATGATAGTAGGTATACGTTGAGATTGCAGGAGCATGCAATAACGTTGAGAGTTGTGAGAGGAGGGCGCAACTGCACCAAGAGTTGTGCGACTTACAAGGAGATGATGATGATGCTTGCAAGGCCTGCTGCGCCTTGTAGCAATTGTGGTTATGTTCAAACTGTGTCTAGTTGTTCTTCACGTATTGGTATTGAAAATGTATAA 861 0.4878 MSSPSPATYSTPPALIAFTLTIVVICFICFSLVYFSRCYFVSIIQTWAFHHSAPSTLIRLSPSNNNASSSSPFRGLDPSLLESFPTFPYSSVKDLRKEETKKYSLECAICLVEFEDDSMLRLLTVCRHVFHQDCVDLWLRSHKTCPVCRTDLETRQSHHDESSVVEEEDCGVGGEVCIDVRESVGEGREERFSRSHSTGHSIVMVRGGGDGLGGDGDDDNDSRYTLRLQEHAITLRVVRGGRNCTKSCATYKEMMMMLARPAAPCSNCGYVQTVSSCSSRIGIENV* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0146 286 Pfam Ring finger domain 106 149 IPR001841 -
Dod02g0146 286 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 156 IPR013083 -
Dod02g0146 286 PANTHER RING FINGER DOMAIN-CONTAINING 4 183 - -
Dod02g0146 286 CDD RING-H2_PA-TM-RING 106 149 - -
Dod02g0146 286 SMART ringv_2 106 149 IPR011016 GO:0008270
Dod02g0146 286 SUPERFAMILY RING/U-box 106 156 - -
Dod02g0146 286 SMART ring_2 107 148 IPR001841 -
Dod02g0146 286 PANTHER RING-H2 FINGER PROTEIN ATL29 4 183 - -
Dod02g0146 286 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0146 Dod-Chr2 2128500 2129360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0146 6 203 C3H Transcription Factor Family AT2G35420 33.953 4.63e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0146 - - ahf:112747412 293.123