Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0145 ATGGCTTTGGAAACTCTTTCATCTAATGAGCTTTCGAACTTCATTATCTATGATACTATCTCAGCAACTCCTTTTATCAGCCATGAATCCTCAGAGGCTAGCATCTTACTAGAAGAAAACAGGGTTGATCATGCATTTGACAACTATGCAAAGGGGACAAGAAAACGCCAATCTGATGAACCAGAAACCATTGTGGGCAGGGTGGTGGGACAAGGGAAGAAGAAGAGAAGAAGAAAGCCAAGGGTGTGCAAGAACAAGGAAGAGGCTGAGACTCAGAGAATGATTCATATTACAGTCGAGAGAAACCGAAGGAAGCAGATGAATGAGCACCTTGCTGTTCTGCGTTCACTCATGCCTGAGTCCTACGTCCAAAGGGGTGATCAGGCTTCTATTGTGGGTGGTGCTATAGAATTTGTGAAGGAGCTGGAGCACCTCTTGCAGTCCCTTGAGGCTCAAAAGTTGCAGCTTTTACAACAAGGAGTGGCTGCACAAGCCAATGAAGACACGACCATTTCCAAATTCATGAGACCACCCTTTTCCAATTTCTTTGTGTATCCGCAGTACACATGGTCCCAGGCTCCTCATAAATTCACATCCCAGACTCAGGCGGCCATAGCTGATATTGAGGTCACTTTGATTGAGACCCATGCAAACCTTAGAATTCTGTCCAAGAGAAGCCCCAGGCAGTTATCAAAGTTGCTTGCTGGTTTTCAAACACTCTACCTCACCATTCTACATCTCAATGTCACCACAATGGACCCCTTGGTCCTCTATTCCATCAACGCCAAGGTTGAAGAAGGATGCCAACTTGGTTCAGTGGATGACATTGCAGCAGCTGTTCACCACTTGCTTAGAATGATTGATGAAGAGGCTTCTCTTTGCAGTTGA 888 0.455 MALETLSSNELSNFIIYDTISATPFISHESSEASILLEENRVDHAFDNYAKGTRKRQSDEPETIVGRVVGQGKKKRRRKPRVCKNKEEAETQRMIHITVERNRRKQMNEHLAVLRSLMPESYVQRGDQASIVGGAIEFVKELEHLLQSLEAQKLQLLQQGVAAQANEDTTISKFMRPPFSNFFVYPQYTWSQAPHKFTSQTQAAIADIEVTLIETHANLRILSKRSPRQLSKLLAGFQTLYLTILHLNVTTMDPLVLYSINAKVEEGCQLGSVDDIAAAVHHLLRMIDEEASLCS* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0145 295 MobiDBLite consensus disorder prediction 52 89 - -
Dod02g0145 295 CDD bHLH_AtFAMA_like 94 153 - -
Dod02g0145 295 PANTHER TRANSCRIPTION FACTOR BHLH71 1 294 - -
Dod02g0145 295 SMART finulus 97 148 IPR011598 GO:0046983
Dod02g0145 295 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 91 142 IPR011598 GO:0046983
Dod02g0145 295 PANTHER MAX DIMERIZATION, MAD 1 294 - -
Dod02g0145 295 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 90 160 IPR036638 GO:0046983
Dod02g0145 295 Gene3D - 83 159 IPR036638 GO:0046983
Dod02g0145 295 Coils Coil 139 159 - -
Dod02g0145 295 Pfam Helix-loop-helix DNA-binding domain 92 143 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0145 Dod-Chr2 2119025 2120596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0145 83 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 57.377 3.35e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod02g0145 HLH 3.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0145 - - pvu:PHAVU_003G284500g 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0145 02 2119025 2120596 Dod02g0145 02 2119025 2120596 ECH