Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0144 ATGGCATCTCTTGGCAACCCAAGAACATGGGTTCCATACATGAACAGCAAGGACTGTTCCCAAGGATTTTGCAGCTTGTACTGTCCACAATGGTGTTATGTGGTGTATCCTCCTCCTCCTCCCTTTGAATTCCCTGATGAAGATTCAAGTCCAAATTTCTCCCCTCTTGTTATAGCAATCATTGGTGTCTTGGCCAGTGCTTTTCTCCTTGTGAGCTACTACACCATAATATCCAAGTACTGCGGCCGCAGAGAATCATCATCTTCAGAAACAGAGAGCCATGAAGAAGCAACCCTTGTGTTGGAAGACAATCAAAACCCTTCACTCCATGAGCCGTGGCATGTCACAACCACTGGCCTAGATGAGGCACTGATAAAGTCCATAACAGTTTGCAAGTACAAGAGAGGAGAAGGGCTGGTTGAGGTAACAGATTGTTCAGTTTGTCTCAGTGAGTTCCAAGATGGTGAGAGCATTAGGCTCTTGCCAAAGTGCAGCCATGCCTTTCACATCCCTTGCATTGACACGTGGCTCAAGTCTCACTCCAATTGCCCTCTGTGCCGTGCTAGCATATTCATCTTCAATGCTGCACCTTTTCATCATCACGTGCCAGCCCCTTTGGTGGAACTCCCTTCAAGGAACGAGGCTTCTTCGGAAAACAATCAGCATGTGGATGTAAACGTGGCTAATGCAAGCGATGCTACTGAGTTGGATGTGGTAGAAGAAGAAGGCCCACTGCATCATGGTAGAGCAGTTCCAAAGAGCGCATTTCGTGCTTTCAGTGACTTAGGCAACTTGAGGGGAAGGCATAGCGTGATTGAGATTAGAGATGAAGAATATGAATCTTTTAGAAGGTCGGTGTCTATGGACCATTCATTTCAAAGGGGTCTTTCAGTTGCTGATGTGCTTCAAATGAATCAAGATCATGGTTCCCAAATAGAAGGATGTTCAAGTGAAGCTGGTCCTTCAAAGAGAACAAGGGGTGAGAGTAGCAAATCAAGCTATAGAAGAAGGGTCTTGCATTGTGTTTTGAGTCCAATTGCAATGAAGAGGTCTTTTTCCAGTGGAAGATTCTCCCTTAGCAGAAACGGCAGGGGAAGGCAGGGGATTTTCCCTGTATGA 1119 0.4602 MASLGNPRTWVPYMNSKDCSQGFCSLYCPQWCYVVYPPPPPFEFPDEDSSPNFSPLVIAIIGVLASAFLLVSYYTIISKYCGRRESSSSETESHEEATLVLEDNQNPSLHEPWHVTTTGLDEALIKSITVCKYKRGEGLVEVTDCSVCLSEFQDGESIRLLPKCSHAFHIPCIDTWLKSHSNCPLCRASIFIFNAAPFHHHVPAPLVELPSRNEASSENNQHVDVNVANASDATELDVVEEEGPLHHGRAVPKSAFRAFSDLGNLRGRHSVIEIRDEEYESFRRSVSMDHSFQRGLSVADVLQMNQDHGSQIEGCSSEAGPSKRTRGESSKSSYRRRVLHCVLSPIAMKRSFSSGRFSLSRNGRGRQGIFPV* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0144 372 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 192 IPR013083 -
Dod02g0144 372 PANTHER RING-H2 FINGER PROTEIN ATL53-RELATED 1 363 - -
Dod02g0144 372 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 1 363 IPR044675 -
Dod02g0144 372 CDD RING-H2_PA-TM-RING 144 187 - -
Dod02g0144 372 SUPERFAMILY RING/U-box 129 193 - -
Dod02g0144 372 SMART ring_2 145 186 IPR001841 -
Dod02g0144 372 MobiDBLite consensus disorder prediction 308 332 - -
Dod02g0144 372 Pfam Ring finger domain 144 187 IPR001841 -
Dod02g0144 372 ProSiteProfiles Zinc finger RING-type profile. 145 187 IPR001841 -
Dod02g0144 372 MobiDBLite consensus disorder prediction 308 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0144 Dod-Chr2 2109180 2111239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0144 1 351 C3H Transcription Factor Family AT3G03550 40.789 1.50e-70 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0144 - - gmx:100792267 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0144 02 2109180 2111239 Dod02g0144 02 2109180 2111239 ECH