Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0134 ATGGCCTCCGATGCCTTCACCGACAAGAACGCCATCTTCCGGAAGCTCAAGGCCAAGTCCGATAACAAGATGTGTTTCGATTGCAATGCGAAGAACCCAACTTGGGCCTCCGTCACCTACGGGATCTTCCTCTGCATCGATTGCTCCGCTGTTCATCGCAGTCTCGGCGTCCACATCAGCTTTGTCAGATCTACAAATTTAGACTCATGGAGTCCTGAGCAACTAAAATTGATGAGCTTTGGAGGAAACAATCGTGCACATGTTTTCTTTAAGCAACATGGATGGACTGATGGTGGTAAAATAGAAGCCAAGTATACATCAAGAGCTGCAGAGTTATATAGACAAATTCTTTCGAAGGAAGTAGCTAAAAGTATGGCTGAGGAGGCAGGTTCACCATCGTTACCTGTTGCTTCTTCTTCTGCTCAAGCAGCTAATGGACTTCCTGAAGTAAGGACCAATGAATTACCAAAAGAAAATATTGTGGGAAAGCCTGAAATGCCTGAGAAAACTACTTCAGCTAGAGCTTCACATATAATTGTTTCCAGCACTGTCAAGAAGCCTATTAGTACTAAAAAAACTGGGAAGGCTAATGGACTTGGTGCCCGGAAGCTCACTACAAAGCCAACTGAGTCTCTCTATGACCAGAAGCCAGAAGAACCACCTGCTCCAGTACCATCCTCAGCAAAAAGCAAGATTTCTGCTGGGCCATCACTGACATCTCGGTTTGAGTATGTAGAAAATGTCCAATCATCTGAGTCGAATTCTGGAGGTGGGGGTACAAATGTGCTTAGTCATGTGGCTCCACCAAAGTCATCAAGCTTCTTTGCAGACTTTGGAATGGATAGTGGGTTTCCAAGGAAATCTGGGTCAAATTCATCTAAAGTGCAAATTCCGGAATCTGATGAAGCAAGAAAGAAGTTCTCAAATGCTAAATCTATTTCTTCATCTCAATTTTTTGGAGATCAGAACAAAGCTGCAGATGTGGCTGCTCAAGCTACTTTGTCAAAATTTTCAGCTTCAACTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCATCAGATAACTCCCTTGATCTCGCTGCCAGTGACCTCATCAATCGCCTATCTTTCCAGGCGCAACAAGATATATCTTCCCTTAAAAACATTGCTGGAGAGACTGGGAAGAAGCTCAGCTCCTTGGCCTCCACTTTGATGACAGATCTTCAGGACCGAATACTCTAA 1221 0.4423 MASDAFTDKNAIFRKLKAKSDNKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLKLMSFGGNNRAHVFFKQHGWTDGGKIEAKYTSRAAELYRQILSKEVAKSMAEEAGSPSLPVASSSAQAANGLPEVRTNELPKENIVGKPEMPEKTTSARASHIIVSSTVKKPISTKKTGKANGLGARKLTTKPTESLYDQKPEEPPAPVPSSAKSKISAGPSLTSRFEYVENVQSSESNSGGGGTNVLSHVAPPKSSSFFADFGMDSGFPRKSGSNSSKVQIPESDEARKKFSNAKSISSSQFFGDQNKAADVAAQATLSKFSASTAISSADLFGDSSDNSLDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASTLMTDLQDRIL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0134 406 MobiDBLite consensus disorder prediction 133 147 - -
Dod02g0134 406 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Dod02g0134 406 SUPERFAMILY ArfGap/RecO-like zinc finger 11 125 IPR037278 -
Dod02g0134 406 MobiDBLite consensus disorder prediction 131 235 - -
Dod02g0134 406 MobiDBLite consensus disorder prediction 285 306 - -
Dod02g0134 406 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD9-RELATED 1 406 - -
Dod02g0134 406 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Dod02g0134 406 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 1 406 - -
Dod02g0134 406 Pfam Putative GTPase activating protein for Arf 12 106 IPR001164 GO:0005096
Dod02g0134 406 MobiDBLite consensus disorder prediction 174 190 - -
Dod02g0134 406 CDD ArfGap_ArfGap2_3_like 8 123 - -
Dod02g0134 406 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Dod02g0134 406 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Dod02g0134 406 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Dod02g0134 406 Gene3D Arf GTPase activating protein 1 141 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0134 Dod-Chr2 2013986 2019225 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0134 13 91 C2H2 Transcription Factor Family AT4G21160 46.250 5.78e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0134 K12493 K11855 gmx:100789796 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0134 02 2013986 2019225 Dod02g0134 02 2013986 2019225 ECH
Dod02g0134 02 2013986 2019225 Dod05g0273 05 3481957 3486597 PCT