Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0133 ATGAACCTGTGGACAGACGACAACTCCTCCGTCATGGAGGCCTTCATGACCTCCTCCGACCTCTCCTCCCTCTGGCCCCCACCCCCACCGCCCACACAATCCGCTGTCACCTCATCCGCCGCCACCGCCGCCGTCTTCAACCAGGACACCCTCCAGCAGCGCCTCCAGGCCCTCATCGAGGGCGCCAGGGAGTGCTGGACCTACGCCATCTTCTGGCAGTCCTCCTACGACTACTCAACCGCCGCCGGCGCCACCTCAATCCTCGGCTGGGGCGATGGCTACTACAAGGGCGAAGAGGACAAGGCCAAGTCCAAGAACTCCGCCAAGATGACCTCCCCGGAGGAGCAGGAGCACCGCAAGAAGATCCTCCGCGAGCTCAATTCCCTCATCTCCGGCTCCTGCGCCGCCACCGGCGACGACGTCGACGAGGAAGTCACCGACACCGAGTGGTTCTTCCTCATCTCCATGACGCAGAACTTCGTCAACGGCGCAGGACTCCCCGGCCACGCCTTCTACCACTCCACACCGGTCTGGCTCACCGGTCCGGACCGCCTCGCAGGCTCGGCGTGCGATCGTGCCAAGCAGGGTCAGGTCTTCGGTCTCCAAACCCTAGTTTGCATCCCTTCGGCAAACGGCGTCGTTGAGCTCGGTTCGACGGAGCTGATCTTCCAGAACTCCGATCTGATGAATAAAGTTAGGGTTCTCTTCAATTTCAATAACGACATGGGCTCATCGTGGCCGTTAACTGGGAGCACGACAACCACAGCCGCCGATCAAGGCGAGAACGACCCTTCCTCTCTGTGGCTCAACGACCCTGAAATTAGGGATTCCGTTGATACGGTTACAACCGCTCCGGCTTCTGTTGTTTCCGTTAACCACGTGCAAGGGATTGCGAAGCCGATGCAGTTTGAAACCCCTGGTTCCAGCACTTTAACGGAGACGCCAAGCGCCGTTCACATACCTAACACTCCTCCTCACGGCGGTGCCCCTCAATCGCAGAACCAGAGCTTCTTCTCAAAGGAATTGAACTTCTCCGAGTACGGATTTGACCCTAACGGCGTTAAAACGGGGACTAACCACAATCATCATTCTCTGAAGCCTGAATCCGGCGAGATTCTGAGCTTCGGAGAGAGCAAGAGGAGCTCCTACGACGGCGGAAGCGGGAACTTCTTCTCCGGCCAGTCGCCGTTCGTCGCCGCCGCTGCCGAAGACAACAACGGCAAGAAGAGGCGGTCGCCGAATTCGAGGGGAAGCAACAACGACGACGGGATTCTCTCCTTCACTTCTGGCGTGATTCTGCCGCCGTCGAACATGAAATCCAGCGGCGGCGGCGGCGGCGGAGATTCCGACCACTCGGATCTCGAGGCTTCGGTGGTGAAGGAGGCCGACAGCAGCAGGGTGGTGGAGCCGGAGAAACGACCACGGAAGAGAGGGAGGAAACCGGCGAACGGAAGAGAAGAGCCGTTGAACCACGTGGAAGCAGAGAGGCAGAGAAGAGAGAAGCTGAATCAGAGATTCTACGCTCTCCGCGCGGTGGTTCCAAACGTATCGAAGATGGACAAAGCGTCACTCCTCGGCGACGCCATTTCCTACATCACGGAGCTCAAGTCAAAGCTCCAAACCCTTGAATCGGACAAAGACGGAATGGAGAAGCAACTTGATTCCGTGAAGAAGGAGCTCGAGAAGGCCAAGAAGGACTCTTCCTCCGGTCCCCCATCTTCCGTCCCTGAAAAGGAACTGAGGATGTCAAACAACGTTGCTGGTGGGAAGCTGGTTGATTTGGACATAGACGTGAAGATCATTGGGTGGGACGCGATGATAAGGATCCAATGCAACAAGAAGAACCACCCCGCGGCGAGGTTGATGGCGGCGCTGATGGAGCTTGACTTGGACGTGCACCACGCCAGCGTCTCGGTGGTGAATGATTTGATGATCCAGCAGGCAACGGTGAAGATGGGGAGCAGGTTCTACACGCAGGAGCAGCTTCGCTCCGCGTTAACATCCAAAGTTGGTGGTGGTGATGTCCGATAG 2031 0.5805 MNLWTDDNSSVMEAFMTSSDLSSLWPPPPPPTQSAVTSSAATAAVFNQDTLQQRLQALIEGARECWTYAIFWQSSYDYSTAAGATSILGWGDGYYKGEEDKAKSKNSAKMTSPEEQEHRKKILRELNSLISGSCAATGDDVDEEVTDTEWFFLISMTQNFVNGAGLPGHAFYHSTPVWLTGPDRLAGSACDRAKQGQVFGLQTLVCIPSANGVVELGSTELIFQNSDLMNKVRVLFNFNNDMGSSWPLTGSTTTTAADQGENDPSSLWLNDPEIRDSVDTVTTAPASVVSVNHVQGIAKPMQFETPGSSTLTETPSAVHIPNTPPHGGAPQSQNQSFFSKELNFSEYGFDPNGVKTGTNHNHHSLKPESGEILSFGESKRSSYDGGSGNFFSGQSPFVAAAAEDNNGKKRRSPNSRGSNNDDGILSFTSGVILPPSNMKSSGGGGGGDSDHSDLEASVVKEADSSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKSKLQTLESDKDGMEKQLDSVKKELEKAKKDSSSGPPSSVPEKELRMSNNVAGGKLVDLDIDVKIIGWDAMIRIQCNKKNHPAARLMAALMELDLDVHHASVSVVNDLMIQQATVKMGSRFYTQEQLRSALTSKVGGGDVR* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0133 676 MobiDBLite consensus disorder prediction 304 334 - -
Dod02g0133 676 MobiDBLite consensus disorder prediction 559 580 - -
Dod02g0133 676 MobiDBLite consensus disorder prediction 403 496 - -
Dod02g0133 676 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 489 554 IPR036638 GO:0046983
Dod02g0133 676 PANTHER MYC 39 671 IPR045084 GO:0003700|GO:0006355
Dod02g0133 676 MobiDBLite consensus disorder prediction 349 369 - -
Dod02g0133 676 CDD bHLH_AtAIB_like 483 559 - -
Dod02g0133 676 MobiDBLite consensus disorder prediction 304 319 - -
Dod02g0133 676 Gene3D - 478 568 IPR036638 GO:0046983
Dod02g0133 676 MobiDBLite consensus disorder prediction 453 496 - -
Dod02g0133 676 Coils Coil 532 566 - -
Dod02g0133 676 SMART finulus 492 541 IPR011598 GO:0046983
Dod02g0133 676 MobiDBLite consensus disorder prediction 249 266 - -
Dod02g0133 676 Pfam Helix-loop-helix DNA-binding domain 490 535 IPR011598 GO:0046983
Dod02g0133 676 MobiDBLite consensus disorder prediction 417 436 - -
Dod02g0133 676 MobiDBLite consensus disorder prediction 249 271 - -
Dod02g0133 676 PANTHER TRANSCRIPTION FACTOR MYC2 39 671 - -
Dod02g0133 676 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 51 236 IPR025610 -
Dod02g0133 676 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 486 535 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0133 Dod-Chr2 1984989 1987841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0133 1 671 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 55.248 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod02g0133 bHLH-MYC_N 6.4e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0133 K13422 - gmx:100776289 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0133 02 1984989 1987841 Dod02g0133 02 1984989 1987841 ECH