Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0119 ATGTTTGTTTGTGTATTTTGGAGTCTGATGTCTCCGCCGGTGCTGGTTCCGGAGGAGGAGGGGCAGAGCAAAATCTCTTCGACAGTAGCATCTGCATCTTCACAACCCTTGGACTGTTTCTCCCAAAATGGGGGTGGATTGAAAGAGCGCAATTACCTTGGATTGTCTGATTGCTCATCAGTGGACAGTTCTAATTCTGCTGTCCCTAGCTTGTCTGATCAGAAAAAGGGCAACCTGAATTTGAAGGCTACAGAGTTGAGGCTTGGTCTCCCCGGATCCCAATCGCCTGAAAGGGATCCAGATGTTTACTCTTTGAGCTCAACGAAGCTCGATGAGAAGCAGCTGTTCCCTTTGCTTCCTTCGAAAGATGGAATCTGCTCATCGTCCCAGAAGACTGTCGTGGTTTCAGGAAACAAAAGGGGTTTTGCGGATACCATGGATGGGTTCACTCAGCCTGCCACAGTTAAGGAAATGCCAAGCAAGGTGTTACCAGAACGACCTTGTGCTGCTAATGGAAATGGTCATAATCATGGCCATACAGGTGCTTCTGTCAGTGGCAGTGCCCCAGCTTCTAAGGCGCAGGTTGTTGGTTGGCCTCCTATAAGGTCGTTTAGGAAAAATTCTATGGCAACTACATCAAAGAACAATGATGAAGTGGATGGAAAACCCGGTCCTGCTGCACTCTTTGTGAAGGTCAGCATGGATGGTGCTCCCTATCTCAGGAAGGTGGATCTGAGAACTTATGCAACGTATCAGGAACTATCTTCTGCCCTTGAGAAGATGTTCACTTGTTTTACCCTAGGTCAGTGTGGTTCCCATGGAGCTCCAGGAAGAGAAATGTTGAGTGAGAGCAAGCTGAGGGACCTTCTGCATGGTTCAGAATATGTACTCACTTATGAGGATAAAGATGGGGATTGGATGCTTGTGGGGGATGTACCATGGGATATGTTCATTGACACTTGCAAAAGGCTGAAAATCATGAAGGGTTCTGACGCTATTGGCTTAGCTCCCAGGGCCATGGAGAAGTCCAAAAGCAGGAGTTAA 1044 0.477 MFVCVFWSLMSPPVLVPEEEGQSKISSTVASASSQPLDCFSQNGGGLKERNYLGLSDCSSVDSSNSAVPSLSDQKKGNLNLKATELRLGLPGSQSPERDPDVYSLSSTKLDEKQLFPLLPSKDGICSSSQKTVVVSGNKRGFADTMDGFTQPATVKEMPSKVLPERPCAANGNGHNHGHTGASVSGSAPASKAQVVGWPPIRSFRKNSMATTSKNNDEVDGKPGPAALFVKVSMDGAPYLRKVDLRTYATYQELSSALEKMFTCFTLGQCGSHGAPGREMLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWDMFIDTCKRLKIMKGSDAIGLAPRAMEKSKSRS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0119 347 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 22 340 IPR003311 GO:0005634|GO:0006355
Dod02g0119 347 SUPERFAMILY CAD & PB1 domains 225 328 - -
Dod02g0119 347 Pfam AUX/IAA family 84 338 IPR033389 -
Dod02g0119 347 PANTHER AUXIN-INDUCED PROTEIN 22 340 - -
Dod02g0119 347 ProSiteProfiles PB1 domain profile. 227 331 IPR000270 GO:0005515
Dod02g0119 347 Gene3D - 224 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0119 Dod-Chr2 1836025 1839571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0119 231 337 B3 DNA Binding Superfamily AT4G23980 29.907 1.12e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Dod02g0119 AUX_IAA 1.4e-90 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0119 K14484 - gmx:547502 535.798