Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0077 ATGAAGCATGTAACAAAGCAAGAATTTATTGCATCACTGAGAAGGAAAAGTAGTGGCTTTTCTAGGGGAGCTTCCATATACCGGGGTGTTACAAGGCATCATCAACAGGGTAGATGGCAAGCAAGAATTGGCCGTGTTGCGGGAAATAAGGATTTATACTTGGGAACATTTGCAACCGAAGAGGAAGCAGCTGAGGCATATGACATAGCAGCCATAAAGTTCAGAGGTGCAAATGCTGTAACCAATTTTGAGATGAGCCGGTATGACGTGGAAGCCATAATGAAGAGTTCTCTGCCAGTTGGCGGGGCAGCAAAACGCTTGAAGCTTTCCTTAGAATCAGAGCAAAAACCCACTCTCAGCAGCAGCAGCAACGGCAGCCAGCAGCAACCCCCGTGTGCAAATGTGGGTGGCAGCATCAATTTCTCAGCCATTCATCAGCCAGTTGCCACTATCCCTTGTGGAATCCCGTTTGATTCTGCTGCAGCATATTATCACCACAGCCTCTTCCACCACTTTCATGCTGCCAACACTGCCACAGCAGAATCTGCCTTCACTTCCACCAATGCAACTGGATTTGCTGCACTGCCACCACCACCAGCAGCACCTGAGTTCTTCATATGGCCTCATCAGACCTATTGA 639 0.4836 MKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMSRYDVEAIMKSSLPVGGAAKRLKLSLESEQKPTLSSSSNGSQQQPPCANVGGSINFSAIHQPVATIPCGIPFDSAAAYYHHSLFHHFHAANTATAESAFTSTNATGFAALPPPPAAPEFFIWPHQTY* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0077 212 ProSiteProfiles AP2/ERF domain profile. 26 84 IPR001471 GO:0003700|GO:0006355
Dod02g0077 212 CDD AP2 25 86 IPR001471 GO:0003700|GO:0006355
Dod02g0077 212 Pfam AP2 domain 26 76 IPR001471 GO:0003700|GO:0006355
Dod02g0077 212 SMART rav1_2 26 90 IPR001471 GO:0003700|GO:0006355
Dod02g0077 212 Gene3D AP2/ERF domain 26 86 IPR036955 GO:0003700|GO:0006355
Dod02g0077 212 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 1 209 - -
Dod02g0077 212 SUPERFAMILY DNA-binding domain 25 86 IPR016177 GO:0003677
Dod02g0077 212 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 209 - -
Dod02g0077 212 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Dod02g0077 212 PRINTS Ethylene responsive element binding protein signature 66 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0077 Dod-Chr2 1261015 1302706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0077 2 91 AP2-EREBP Transcription Factor Family AT5G65510 39.394 1.39e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Dod02g0077 AP2 5.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0077 K09285 - gmx:100775390 335.109